Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq159 132 5e-26 >seq159 Length=112901 Score = 132 bits (146), Expect = 5e-26 Identities = 151/200 (76%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 14589 CCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14648 ||||||||||||| || || ||||||||||| ||||| || ||||||| | ||||| Sbjct 34591 CCAAATTTTCATTGACAATGCCATCACTAGCAGCAAAGAAGGCCAATACATGAGAAATAA 34650 Query 14649 AGTATTGCTCTTCATTGCTG-AGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACT 14707 | | || || || | ||| || || | ||| | |||| || ||||||||||||||| Sbjct 34651 AATGTTTTTCCTC-TGGCTTCAGCTTCTCCCAGTGTCCTAAGTCTTTAGAAAGATCTACT 34709 Query 14708 TCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATATTTCTTTATAT 14767 || ||| | ||||||||| || | |||||||| |||||| ||| || |||| |||| Sbjct 34710 TCTTCAGCAGTCCAAAAAGATGCCTCTGCTTTTTTGTACATTTTCCAGATGTCTTGATAT 34769 Query 14768 AATATAGGAAAAACTACAAA 14787 ||||||||||| ||||| Sbjct 34770 TTTATAGGAAAAATGACAAA 34789 Score = 109 bits (120), Expect = 5e-19 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 ||||||| || || |||||||| || ||||| | |||||||| | |||| ||| | Sbjct 33782 CCTCATCCCTGCTGATAAGTTCATTGCTGAATGTCAGGCCTGGCATGATACCTCTTTTCT 33841 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | | |||||| || | ||| || || || || ||||| || || || ||||||||||| | Sbjct 33842 TGAGCCAAAAGATGGAAGCAAAAGAACCAGAGAAGAAGATCCCTTCCACTGCAGCAAAAG 33901 Query 14346 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14405 | || | || ||| |||| || |||||| ||||| | ||||||| |||| Sbjct 33902 CAATAACTCTCTCTGCAAAGCTGGCATTTTTGGCATTGATCCAGCGTATAGCCCAGTCAG 33961 Query 14406 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAA 14445 ||||| || | | || ||| |||||||| ||||| || Sbjct 33962 CCTTTTTCTTTACACAAGGCATAGTTTCAATTGCATTGAA 34001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482322507704400