Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq159 93.3 6e-14 >seq159 Length=112901 Score = 93.3 bits (102), Expect = 6e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 125331 CTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGG 125390 ||||| || ||||| || || |||| | | || ||||||||| | |||| || || Sbjct 34004 CTCTTCAATGCAATTGAAACTATGCCTTGTGTAAAGAAAAAGGCTGACTGGGCTATACGC 33945 Query 125391 TGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAG 125450 |||||| ||| | | || | | || || ||| | | || || || || || || Sbjct 33944 TGGATCAATGCCAAAAATGCCAGCTTTGCAGAGAGAGTTATTGCTTTTGCTGCAGTGGAA 33885 Query 125451 GGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATG 125510 || |||||||| || ||| |||||| ||||||||||||||||||| | || ||||| Sbjct 33884 GGGATCTTCTTCTCTGGTTCTTTTGCTTCCATCTTTTGGCTCAAGAAAAGAGGTATCATG 33825 Query 125511 CCCGGACTGACGCACAGTAACGAGTTTAT 125539 || || ||||| ||| || || |||| Sbjct 33824 CCAGGCCTGACATTCAGCAATGAACTTAT 33796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741023721790800