Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1979 87.8 2e-12 seq3660 82.4 8e-11 >seq1979 Length=378058 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 95102 TGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAAC 95161 |||||||||||||||| || || || || || |||||||| ||||| ||||| | || | Sbjct 365206 TGGCCCCCATGCCCACAGCTTCTACAGCACAAATCCTTGGTAACAATGAGTCCATAGAGC 365265 Query 95162 CCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCC 95209 | | |||| |||| | |||| ||| |||||||| | || ||||||| Sbjct 365266 CATACACCAGCAACCTCTACACAAGGAGGGTGCTCTCTGGAGAATTCC 365313 >seq3660 Length=165149 Score = 82.4 bits (90), Expect = 8e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 95102 TGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAAC 95161 |||||||||||||||| || || || || || |||||||| ||||| ||||| | || | Sbjct 81068 TGGCCCCCATGCCCACAGCTTCTACAGCACAAATCCTTGGTAACAATGAGTCCATAGAGC 81127 Query 95162 CCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCC 95209 | | |||| |||| | |||| || |||||||| | || ||||||| Sbjct 81128 CATACACCAGCAACCTCTACACAAGAAGGGTGCTCTCTGGAGAATTCC 81175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494699515126800