Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq3660 95.1 1e-14 seq1979 95.1 1e-14 >seq3660 Length=165149 Score = 95.1 bits (104), Expect = 1e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||| |||| | ||||||||||| | | ||||||||||||| | |||||| ||||| || Sbjct 81146 TAGAGGTTGCTGGTGTATGGCTCTATGGACTCATTGTTACCAAGGATTTGTGCTGTAGAA 81087 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 |||||||||||||| |||| | |||||||| Sbjct 81086 GCTGTGGGCATGGGGGCCAGCAACAGGCTGTT 81055 >seq1979 Length=378058 Score = 95.1 bits (104), Expect = 1e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||| |||| | ||||||||||| | | ||||||||||||| | |||||| ||||| || Sbjct 365284 TAGAGGTTGCTGGTGTATGGCTCTATGGACTCATTGTTACCAAGGATTTGTGCTGTAGAA 365225 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 |||||||||||||| |||| | |||||||| Sbjct 365224 GCTGTGGGCATGGGGGCCAGCAACAGGCTGTT 365193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613477828342800