Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq3399 178 1e-38 seq3541 158 1e-32 seq3583 154 1e-31 seq402 129 5e-24 seq3664 87.8 1e-11 >seq3399 Length=704810 Score = 178 bits (196), Expect = 1e-38 Identities = 369/547 (67%), Gaps = 2/547 (0%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| |||||||| || || || || || | ||||||||||||| || |||| || Sbjct 540383 AGCGATAGGTATTGACTTGGGGACAACCTTCTCCTGTGTTGGTGTTTATCAGCATGGAAA 540324 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 |||||||| || || || || || || ||| |||| || || || ||| | ||||| Sbjct 540323 GGTTGAAATCATCGCAAACGACCAGGGCAACCGAACGACACCGAGCTACGTTGCCTTCAC 540264 Query 550111 GGAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCA 550169 || | ||| | ||| | | || ||||| || ||| |||||| | || || | Sbjct 540263 AGACAGTGAGAGATTGA-TCGGCGATGCGGCTAAAAATCAAGTTGCCCTCAACCCACAGA 540205 Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGG 550229 | || | || || || || | | ||||| | | ||| ||||| | | || |||| Sbjct 540204 ACACAGTGTTCGACGCAAAGAGACTGATTGGCCGTAAATTTGATGATCCAGCGGTGCAGG 540145 Query 550230 CAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG 550289 |||| | || || ||||| ||| | ||||| || | | || ||||| | || ||| Sbjct 540144 CAGACAGCAAACACTGGCCCTTCAAGATTGTGAACGATGGCGGTAAACCCAAGGTTCAAG 540085 Query 550290 CTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349 | | |||| || ||| | || ||| |||| ||||||||| | | Sbjct 540084 TTGAATACAAAGGTGAGACCAAGAAATGCACTCCTGAAGAAATAAGCTCTATGGTTCTCA 540025 Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAA 550409 || |||||| | ||||| || | | ||||| | || | || || || || | Sbjct 540024 CTAAGATGAAAGAGACAGCAGAAGCATACTTGGGTCAGAAGGTCAACGAAGCTGTTATCA 539965 Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469 |||| ||||| || ||||||||||||||| | || || |||||||||||||| || | Sbjct 539964 CTGTGCCAGCCTACTTTAATGACTCACAAAGACAGGCCACTAAAGATGCTGGTGCAATAG 539905 Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529 | || || || || ||||||||||||||||| || || |||||||| ||||| ||||||| Sbjct 539904 CAGGTCTGAAAGTACTTCGTATTATCAATGAGCCAACAGCTGCTGCCCTTGCTTATGGAC 539845 Query 550530 TTGATAA 550536 | || || Sbjct 539844 TAGACAA 539838 Score = 172 bits (190), Expect = 4e-37 Identities = 368/547 (67%), Gaps = 2/547 (0%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| |||||||| || || || || || | ||||||||||||| || |||| || Sbjct 551520 AGCGATAGGTATTGACTTGGGGACAACCTTCTCCTGTGTTGGTGTTTATCAGCATGGAAA 551461 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 |||||||| || || || || || || ||| |||| || || || ||| | ||||| Sbjct 551460 GGTTGAAATCATCGCAAACGACCAGGGCAACCGAACGACACCGAGCTACGTTGCCTTCAC 551401 Query 550111 GGAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCA 550169 || | ||| | ||| | | || ||||| || ||| |||||| | || || | Sbjct 551400 AGACAGTGAGAGATTGA-TCGGCGATGCGGCTAAAAATCAAGTTGCCCTCAACCCACAGA 551342 Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGG 550229 | || | || || || || | | ||||| | | ||| ||||| | | || |||| Sbjct 551341 ACACAGTGTTCGACGCAAAGAGACTGATTGGCCGTAAATTTGATGATCCAGCGGTGCAGG 551282 Query 550230 CAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG 550289 |||| | || || ||||| ||| | ||||| || | | || ||||| | || ||| Sbjct 551281 CAGACAGCAAACACTGGCCCTTCAAGATTGTGAACGATGGCGGTAAACCCAAGGTTCAAG 551222 Query 550290 CTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349 | | |||| || ||| | || ||| |||| ||||||||| | | Sbjct 551221 TTGAATACAAAGGTGAGACCAAGAAATGCACTCCTGAAGAAATAAGCTCTATGGTTCTCA 551162 Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAA 550409 || |||||| | ||||| || | | ||||| | || | || || || || | Sbjct 551161 CTAAGATGAAAGAGACAGCAGAAGCATACTTGGGTCAGAAGGTCAACGAAGCTGTTATCA 551102 Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469 |||| ||||| || ||||||||||||||| | || || |||||||||||||| || | Sbjct 551101 CTGTGCCAGCCTACTTTAATGACTCACAAAGACAGGCCACTAAAGATGCTGGTGCCATAG 551042 Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529 | || || || || |||||||||||||| || || || |||||||| ||||| ||||||| Sbjct 551041 CAGGTCTGAAAGTACTTCGTATTATCAACGAGCCAACAGCTGCTGCCCTTGCTTATGGAC 550982 Query 550530 TTGATAA 550536 | || || Sbjct 550981 TAGACAA 550975 Score = 150 bits (166), Expect = 1e-30 Identities = 525/813 (65%), Gaps = 10/813 (1%) Strand=Plus/Minus Query 551782 CTACTAGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATG 551839 ||||| ||| ||| | || |||||||| ||||| ||||| || || |||| | || Sbjct 539733 CTACTGCTGGTGATACACACCTTGGTGGTGAAGACTTTGACAACAGGATGGTCAACCAC- 539675 Query 551840 GTGTGTTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCT 551899 | || | || || || || ||| ||||| || | | | || ||| | Sbjct 539674 -TTCGTACAGGAATTCAAGCGCAAATACAAAAAAGACATCAGTGGTAATAACAGAGCAAT 539616 Query 551900 TCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAAC 551959 || ||||| ||||| || || || ||||| || || | || || || | || | Sbjct 539615 GCGACGTCTCAGAACAGCATGTGAGAGAGCAAAGAGAACCCTGTCCAGCAGTTCCCAGGC 539556 Query 551960 CACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGC 552019 || || ||| ||||||| | | ||| || |||| | | || | || ||||| Sbjct 539555 CAACATAGAAATAGATTCCCTGTATGAAGGTGTTGACTTTTATTCCAGCATCAGCAGGGC 539496 Query 552020 CAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGT 552079 || ||| || || | ||| |||| || || | || ||| |||||| ||| ||| Sbjct 539495 CAGATTCGAGGAACTGTGTGCTGACCTTTTCCGTTCTACTCTTGTACCAGTTGAAAAAGC 539436 Query 552080 TTTAAGAGATTCAAAGATTGATAAATC-CAAAGTACATGAAATTGTGCTTGTTGGTGGAT 552138 | | |||| | || | || || || |||| | || |||||||| || || ||||| | Sbjct 539435 TCTTTTAGATGCTAAACTAGACAAGTCACAAATTGCA-GAAATTGTCCTGGTGGGTGGGT 539377 Query 552139 CTACAAGAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATT 552196 ||||| | || || || || | ||||| | ||| | |||| ||||| ||| || | Sbjct 539376 CTACACGTATACCCAAGATCCAGAAAATGCTGAAAGATTTTATG--AATGGAAAAGAACT 539319 Query 552197 AAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTAT 552256 || | |||| ||||||||||||||||| ||||| || ||| | || ||||| || Sbjct 539318 GAACCAGTCCATTAACCCAGATGAGGCTGTTGCTTATGGAGCTGCAGTCCAGGCAGCCAT 539259 Query 552257 TCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCT 552316 | ||||| ||||| | || || || | | || | |||||| ||||| Sbjct 539258 ATTGACTGGAGTCCAGGATGACACTGTAAAAGATGTGTTGCTCATTGATGTTGTGCCTCT 539199 Query 552317 ATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTAC 552376 || || ||| | ||||||| ||||||| | ||||| || | || | || || Sbjct 539198 GTCACTGGGTATTGAAACAGCTGGAGGTGTCATGACAAACTTGGTCACCCGCAACACACG 539139 Query 552377 TATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTAC 552436 |||||| || | ||| | |||| | || ||| | || |||||| | | || | Sbjct 539138 TATTCCCACCAAGACATCGCAGATATTCACCACTTATGCCGACAATCAACCAGGGGTCAG 539079 Query 552437 AATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTT 552496 || || | |||||||| || || | | || || || ||| || |||| || || || Sbjct 539078 CATCCAGGTGTTTGAAGGTGAGAGGGCAATGACCAAGGACAATCATAAACTGGGCACATT 539019 Query 552497 TAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGA 552556 | | || || || || ||||| || ||||| || || || ||||| || ||||| || Sbjct 539018 TGAGCTAAGTGGCATCCCCCCTGCCCCCCGTGGTGTCCCTCAGATTGAGGTGACTTTTGA 538959 Query 552557 TATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 || || || || | || || |||| || || Sbjct 538958 CATTGACGCTAACAGCATCCTGCATGTAACAGC 538926 Score = 145 bits (160), Expect = 6e-29 Identities = 450/692 (65%), Gaps = 6/692 (1%) Strand=Plus/Minus Query 551901 CGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACC 551960 || ||||| ||||| || || || ||||| || || | || || || | || || Sbjct 550751 CGACGTCTCAGAACAGCATGTGAGAGAGCAAAGAGAACCCTGTCCAGCAGTTCCCAGGCC 550692 Query 551961 ACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCC 552020 | || ||| ||||||| | | ||| || |||| | | || | || |||||| Sbjct 550691 AACATAGAAATAGATTCCCTGTATGAAGGTGTTGACTTTTATTCCAGCATCAGCAGGGCC 550632 Query 552021 AAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTT 552080 | ||| || || | ||| |||| || || | || ||| |||||| ||| ||| | Sbjct 550631 AGATTCGAGGAACTGTGTGCTGACCTTTTCCGTTCTACTCTTGTACCAGTTGAAAAAGCT 550572 Query 552081 TTAAGAGATTCAAAGATTGATAAATC-CAAAGTACATGAAATTGTGCTTGTTGGTGGATC 552139 | |||| | || | || || || |||| | || |||||||| || || ||||| || Sbjct 550571 CTTTTAGATGCTAAACTAGACAAGTCACAAATTGCA-GAAATTGTCCTGGTGGGTGGGTC 550513 Query 552140 TACAAGAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTA 552197 |||| | || || || || | ||||| | ||| | |||| ||||| ||| || | Sbjct 550512 TACACGTATACCCAAGATCCAGAAAATGCTGAAAGATTTTATG--AATGGAAAAGAACTG 550455 Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257 || | |||| ||||||||||||||||| ||||| || ||| | || ||||| || Sbjct 550454 AACCAGTCCATTAACCCAGATGAGGCTGTTGCTTATGGAGCTGCAGTCCAGGCAGCCATA 550395 Query 552258 CTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTA 552317 | ||||| ||||| | || || || | | || | |||||| ||||| Sbjct 550394 TTGACTGGAGTCCAGGATGACACTGTAAAAGATGTGTTGCTCATTGATGTTGTGCCTCTG 550335 Query 552318 TCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACT 552377 || || ||| | ||||| | ||||||| | ||||| || | || | || || | Sbjct 550334 TCACTGGGTATTGAAACGGCTGGAGGTGTCATGACAAACTTGGTCACCCGCAACACACGT 550275 Query 552378 ATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACA 552437 ||||| || | ||| | |||| | || ||| | || |||||| | | || | Sbjct 550274 ATTCCCACCAAGACATCGCAGATATTCACCACTTATGCCGACAATCAACCAGGGGTCAGC 550215 Query 552438 ATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTT 552497 || || | |||||||| || || | | || || || ||| || |||| || || ||| Sbjct 550214 ATCCAGGTGTTTGAAGGTGAGAGGGCAATGACCAAGGACAATCATAAACTGGGCACATTT 550155 Query 552498 AATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGAT 552557 | || || || || ||||| || ||||| || || || ||||| || ||||| || Sbjct 550154 GAGCTAAGTGGCATCCCCCCTGCCCCCCGTGGTGTCCCTCAGATTGAGGTGACTTTTGAC 550095 Query 552558 ATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 || || || || | || || |||| || || Sbjct 550094 ATTGACGCTAACAGCATCCTGCATGTAACAGC 550063 >seq3541 Length=188635 Score = 158 bits (174), Expect = 1e-32 Identities = 345/514 (67%), Gaps = 2/514 (0%) Strand=Plus/Plus Query 550025 TGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGA 550084 ||||||||||| | || |||| || ||||| || || ||||| || || || ||| || Sbjct 108970 TGTGTTGGTGTATACCAGCATGGAAAGGTTGAGATCATCGCCAACGACCAGGGCAACCGA 109029 Query 550085 ACTACTCCATCTTATGTTTCTTTCACGGAAACTGA-ACATTTAGTTGGTGATGCAGCAAA 550143 || || || || ||| | ||||| || | || | ||| | | || ||||| || || Sbjct 109030 ACAACACCGAGCTACGTTGCCTTCACAGACAGCGAGAGATTGA-TCGGCGATGCGGCTAA 109088 Query 550144 ATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAG 550203 | |||||| | || || ||||| | || || || || | | ||||| | Sbjct 109089 AAATCAAGTTGCCCTCAACCCACAGAATACAGTGTTCGACGCAAAGAGACTGATTGGTCG 109148 Query 550204 AAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAA 550263 | ||| ||||| | | || |||||||| | || || ||||||||| | |||| || Sbjct 109149 TAAATTTGATGATCCAGCGGTGCAGGCAGACAGCAAACACTGGCCTTTCAAGGTTGTCAA 109208 Query 550264 TGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAAGGATCTGTTAAACAATTTTCACC 550323 || ||| ||||| | | ||| | | |||| || ||| | || Sbjct 109209 TGAAGATGGTAAACCCAAGGTGCAAGTTGAATACAAAGGTGAGACCAAGAAATGCACTCC 109268 Query 550324 AGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGG 550383 ||| |||| ||||||||| | | || ||||| | || || || | | || Sbjct 109269 TGAAGAAATCAGCTCTATGGTTCTCACTAAGATGAAGGAGACGGCAGAGGCCTACTTGGG 109328 Query 550384 TCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCA 550443 ||| | || | || || || || ||||| ||||| || ||||||||||||||| | || Sbjct 109329 TCAGAAGGTCAACGAAGCTGTCATCACTGTGCCAGCCTACTTTAATGACTCACAAAGACA 109388 Query 550444 AGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 || |||||||||||||| || || ||||| || || |||||||||||||| || || Sbjct 109389 GGCCACTAAAGATGCTGGTGCCATAGCAGGACTGAAGGTACTTCGTATTATCAACGAGCC 109448 Query 550504 TACTGCTGCTGCACTTGCATATGGACTTGATAAA 550537 || |||||||| ||||| |||||||| || ||| Sbjct 109449 AACAGCTGCTGCCCTTGCTTATGGACTAGACAAA 109482 >seq3583 Length=179197 Score = 154 bits (170), Expect = 1e-31 Identities = 344/514 (67%), Gaps = 2/514 (0%) Strand=Plus/Plus Query 550025 TGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGA 550084 ||||||||||| | || |||| || ||||| || || ||||| || || || ||| || Sbjct 137149 TGTGTTGGTGTATACCAGCATGGAAAGGTTGAGATCATCGCCAACGACCAGGGCAACCGA 137208 Query 550085 ACTACTCCATCTTATGTTTCTTTCACGGAAACTGA-ACATTTAGTTGGTGATGCAGCAAA 550143 || || || || ||| | ||||| || | || | | | | | || ||||| || || Sbjct 137209 ACAACACCGAGCTACGTTGCCTTCACAGACAGCGAGAGACTGA-TCGGCGATGCGGCTAA 137267 Query 550144 ATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAG 550203 | |||||| | || || ||||| | || || || || | | ||||| | Sbjct 137268 AAATCAAGTTGCCCTCAACCCACAGAATACAGTGTTCGACGCAAAGAGACTGATTGGTCG 137327 Query 550204 AAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAA 550263 | ||| ||||| | | || |||||||| | || || ||||||||| | |||| || Sbjct 137328 TAAATTTGATGATCCAGCGGTGCAGGCAGACAGCAAACACTGGCCTTTCAAGGTTGTCAA 137387 Query 550264 TGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAAGGATCTGTTAAACAATTTTCACC 550323 || ||| ||||| | | ||| | | |||| || ||| | || Sbjct 137388 TGAAGGTGGTAAACCCAAGGTGCAAGTTGAATACAAAGGTGAGACCAAGAAATGCACTCC 137447 Query 550324 AGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGG 550383 ||| |||| ||||||||| | | || ||||| | || || || | | || Sbjct 137448 TGAAGAAATAAGCTCTATGGTTCTCACTAAGATGAAGGAGACGGCAGAAGCCTACTTGGG 137507 Query 550384 TCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCA 550443 ||| | || | || || || || ||||| ||||| || ||||||||||||||| | || Sbjct 137508 TCAGAAGGTCAACGAAGCTGTCATCACTGTGCCAGCCTACTTTAATGACTCACAAAGACA 137567 Query 550444 AGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 || |||||||||||||| || || ||||| || || |||||||||||||| || || Sbjct 137568 GGCCACTAAAGATGCTGGTGCCATAGCAGGACTGAAGGTACTTCGTATTATCAACGAGCC 137627 Query 550504 TACTGCTGCTGCACTTGCATATGGACTTGATAAA 550537 || |||||||| ||||| |||||||| || ||| Sbjct 137628 AACAGCTGCTGCCCTTGCTTATGGACTAGACAAA 137661 >seq402 Length=536460 Score = 129 bits (142), Expect = 5e-24 Identities = 372/567 (66%), Gaps = 29/567 (5%) Strand=Plus/Minus Query 552018 GCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAA 552077 || ||||||||||| || | ||| | ||| |||||| ||| ||| || | ||| Sbjct 66564 GCTAAATTTGAAGAAATAACTGAAGATTTAGTTAATAAAACACTTGGGCCATTACATCAA 66505 Query 552078 GTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGA 552137 ||| ||| |||| || |||||| || || |||||| | | |||||||| Sbjct 66504 GTTATAAAAGATAGTAAAGTTGATATTAAAGAAATAACTGAAATATTAATGGTTGGTGGT 66445 Query 552138 TCTACAAGAATTCCTAAAATTCGCGAAA--TGTT--AAGTTCTTATTTCAATGGTAAAAA 552193 || |||| ||| |||| ||| | ||| | || ||| | || ||| | ||| Sbjct 66444 TCAACAAAAATGCCTATGATTT-CAAAACTTATTGAAAGAG---AATTAAATAGAAAAGT 66389 Query 552194 ATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGC 552253 | | | || ||||||||||||| |||||||| ||||| ||||||||||||| Sbjct 66388 TTCATTTTCAA---TTAATCCAGATGAAGCTGTTGCAATGGGTGCAGCAATTCAAGCAGG 66332 Query 552254 TATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCC 552313 | || | |||| |||| ||| ||||| | | ||||||| | | | Sbjct 66331 TGTTTT------ACAAGGTGATATGAAAG------ATATTTTGTTATTAGATGTAATTTC 66284 Query 552314 TCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATAC 552373 |||| | ||| | |||||| | || ||| | ||||||| | | || | |||||| Sbjct 66283 ATTATCATTAGGTATTGAAACAATGGGTGGTGTAATGACTACTTTAATTACAAAAAATAC 66224 Query 552374 TACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCA---GATAATCAAACTGC 552430 || ||||| |||||| | |||||||| || | || ||||||||| | Sbjct 66223 AACAGTTCCTACATCAAAATCACAAGTATTTTCAAC---TGCAAGTGATAATCAACCAAG 66167 Query 552431 TGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGG 552490 ||| ||||| |||| |||| ||||||||||| | || |||||||| | | || Sbjct 66166 TGTAGACATTCATGTTTTACAAGGTGAAAGAAAATTTGCAAATGATAATAAAACATTAGG 66107 Query 552491 TACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTAC 552550 | ||| | | || ||| |||||||| ||||| |||| |||||||||||||| Sbjct 66106 AAGATTTCAACTTTCAGATATCGAACCTGCTCCACGTGGTATACCACAAATTGAAGTTAC 66047 Query 552551 TTTCGATATCGATGCCAATGGAATTTT 552577 || ||||| |||| ||| |||||| Sbjct 66046 ATTTGATATTGATGAAAATCAAATTTT 66020 Score = 122 bits (134), Expect = 7e-22 Identities = 148/201 (74%), Gaps = 3/201 (1%) Strand=Plus/Minus Query 550382 GGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGT 550441 |||||| || | || | |||||||| ||||| || || |||||||| ||||| | Sbjct 67065 GGTCAAAAAATAACTAAAGCAGTAATTACTGTGCCTGCTTATTTTAACAGTACACAAAGA 67006 Query 550442 CAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAA 550501 |||||||| ||| ||||||| |||||||| | | ||| | | |||| |||||| Sbjct 67005 CAAGCTACAAAAAATGCTGGTAAAATTGCTGGTTTAGAAGTTTTAAGAGTTATAAATGAA 66946 Query 550502 CCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTA 550561 || |||||||||||| | |||||||| |||||||| ||| | |||||| ||| || Sbjct 66945 CCAACTGCTGCTGCATTATCATATGGAATTGATAAAGATA---AAAAAGAACATAAAGTT 66889 Query 550562 CTCATCTTTGATTGTGGAGGT 550582 || | |||||| ||||||| Sbjct 66888 CTTGTTTTTGATCTTGGAGGT 66868 Score = 86.0 bits (94), Expect = 5e-11 Identities = 150/214 (70%), Gaps = 11/214 (5%) Strand=Plus/Plus Query 353426 AAACCACCAATTTTACTTATTTTTCCGGTTAATTCAATTTCTCCAGTCATTGCAACATTG 353485 |||||||||||| ||||| || ||||| ||||||||||||||||||| || Sbjct 105222 AAACCACCAATTGGTAAAATTTTACCTGTTAAAGTTATTTCTCCAGTCATTGCAA---TG 105278 Query 353486 TGGTTT---AtttttttACCAAGTAATAAAGATACAAAAGCAGTTGTGAATGCACATCCA 353542 | ||| ||||||||| ||||| || | || || ||||| |||| ||| Sbjct 105279 TTATTTGAAATTTTTTTATTTTTAAATAATGAAATTAATGCTGTTGTTAATGTTATCCCA 105338 Query 353543 GCAGATGGACCATCTTTTGGTGTTCCTCCGTCAGGAGCATGAACATGGAAACCATATGGA 353602 |||||||| ||||||||||| | | || || ||| |||||| ||| | | ||| | | Sbjct 105339 GCAGATGGTCCATCTTTTGGAACTGCACCTTCTGGAACATGAATATGTATATCATTT--A 105396 Query 353603 AATTCTGTAATAATATTATT--TTTTAACTTTTT 353634 || | ||| ||||||| |||||| ||||| Sbjct 105397 AACT-AAAAATTTTATTATTAATTTTAAATTTTT 105429 >seq3664 Length=164787 Score = 87.8 bits (96), Expect = 1e-11 Identities = 121/169 (72%), Gaps = 3/169 (2%) Strand=Plus/Plus Query 550043 AATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTT 550102 ||||||| |||||||| || |||||||| || |||||||||| ||||||||||||||| Sbjct 118380 AATGGTAGGGTTGAAATCATCGCCAATGACCAGGGTAACAGAATTACTCCATCTTATGTG 118439 Query 550103 TCTTTCA---CGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGT 550159 | |||| | || |||| | | ||||||| || ||||| |||| || | Sbjct 118440 GCCTTCACTCCCGAGGGGGAACGTCTTATTGGTGACGCCGCAAAGAATCAGTTGACAAGC 118499 Query 550160 AATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTT 550208 |||||| ||||| | ||||| |||||| | ||||| | |||| Sbjct 118500 AATCCTGAGAATACCGTCTTTGACATCAAACGTCTTATTGGGCGCAGTT 118548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029093452326700