Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq307 86.0 1e-11 >seq307 Length=93560 Score = 86.0 bits (94), Expect = 1e-11 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 146216 GCTGGATTCTTTTATACGGGATTAAGCGATAAAGTTAAATGCTTCTATTGTGATGGCGGA 146275 ||||| |||||||| | || || | ||| || ||||||||||||| |||| |||| || Sbjct 6919 GCTGGCTTCTTTTACGCTGGCTTTAACGACAATGTTAAATGCTTCTTTTGTAATGGAGGC 6978 Query 146276 TTAAAAGATTGGAAAGCGGGTGAATTACCTTGGAAAGAACACGCTCGTTGGTATGATAAA 146335 | ||| ||||| || | || || ||| |||| ||||| || || |||| | ||| Sbjct 6979 CTGAAAAATTGGGAACCTGGAGATGAACCGTGGACGGAACATGCCCGATGGTTTTCCAAA 7038 Query 146336 TGTGAATATGTAAAAATAGT-AAAAGGTTTAGATTTTAT 146373 |||| ||||| ||| ||| || ||||| || ||||| Sbjct 7039 TGTGGCTATGT-GAAACAGTGCAAGGGTTTGGACTTTAT 7076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899611329045600