Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq159 116 5e-21 >seq159 Length=112901 Score = 116 bits (128), Expect = 5e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 18541 TACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACATATTTAAT 18600 ||||||||| ||||| || || || ||| || || || || ||||| |||| ||| Sbjct 34589 TACCAAATTTTCATTGACAATGCCATCACTAGCAGCAAAGAAGGCCAATACATGAGAAAT 34648 Query 18601 GAAATGTTTTTCATTATCCTTGAGATTGTTCCATTCATCTATATCTTTTGATAGATCAAC 18660 ||||||||||| | ||| || || | ||| | ||| ||||| || ||||| || Sbjct 34649 AAAATGTTTTTCCTCTGGCTTCAGCTTCTCCCAGTGTCCTAAGTCTTTAGAAAGATCTAC 34708 Query 18661 TTCTTCCGATGTCCAAAAAGATGATTCGGCCTGTTTGTACATTTTATAAATATCTTCATG 18720 |||||| | ||||||||||||| || || | |||||||||||| | || |||| || Sbjct 34709 TTCTTCAGCAGTCCAAAAAGATGCCTCTGCTTTTTTGTACATTTTCCAGATGTCTTGATA 34768 Query 18721 TTGTATAGGAAA 18732 || ||||||||| Sbjct 34769 TTTTATAGGAAA 34780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731836961628000