Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq402 113 1e-19 >seq402 Length=536460 Score = 113 bits (124), Expect = 1e-19 Identities = 221/321 (69%), Gaps = 17/321 (5%) Strand=Plus/Plus Query 181035 AAATTGCGATATGATAAAATTATTTTCATGTGTGATGCTGATGTCGATGGTTCTCATATT 181094 ||||| ||||| | ||||| || | ||| ||||| ||||| ||||||||||||||| Sbjct 326968 AAATTAAGATATAACAAAATCATAATTATGACAGATGCAGATGTAGATGGTTCTCATATT 327027 Query 181095 GAAGCACTACTACTAACGTTATTCTATA-ATTATATGAGACCATTAATTGAAAAAGGGCA 181153 | || || || |||| || || |||| ||| | | | |||||||||||| || Sbjct 327028 GCAGTTTTATTATTAACATTTTTATATAGATTTTTTCCGGG-ATTAATTGAAAATAAACA 327086 Query 181154 TGTATATGCGGCTCAGCCACCA--TTATA----TCGAGTAGTTAAAAAGAACGAATCAAT 181207 ||| | | || || |||||| ||||| | ||||| ||||| | ||| || Sbjct 327087 TGTTTTTCTTGCACAACCACCACTTTATAAATTTAAAGTAGGAAAAAAAACTAAAT--AT 327144 Query 181208 TTACCTTAAAGATGATCATGAGTTAAAAGAGTA---TACTAAGAAACATCCAAACGCTGA 181264 ||| || | ||| |||| |||||||| | || ||| | | | | || ||| Sbjct 327145 TTATATTCA----GATGATGAATTAAAAGAAGAAGTTAGTAAAATAGAATCTAAATATGA 327200 Query 181265 AGTTCAACGCTTCAAAGGTCTTGGTGAAATGAACGCAGATCAACTTTGGGAAACAACAAT 181324 | ||||| | | |||||| | ||||||||||| | | |||||||| ||||||||||| Sbjct 327201 AATTCAAAGATATAAAGGTTTAGGTGAAATGAATCCTGGACAACTTTGAGAAACAACAAT 327260 Query 181325 GGATCCAAAAGAAAGAACATT 181345 | |||| || | ||||| || Sbjct 327261 GAATCCTGAAAATAGAACTTT 327281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591832281971840