Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq3215 93.3 4e-14 >seq3215 Length=281622 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 25168 AAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGA 25227 || ||||||||| | ||||| || || || || || || | || || | || || || Sbjct 223249 AATCAACATGCAGATTTTTGTGAAGACTTTGACTGGGAAGACCATTACCCTTGAGGTAGA 223190 Query 25228 AGCCAAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGC 25286 |||| | ||||| || || | || || || ||| || |||||||| ||||| | Sbjct 223189 -GCCATCAGATACCATTGAAAATGTGAAGGCCAAGATTCAAGACAAAGAGGGGATACCAC 223131 Query 25287 CCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCG 25346 | || || ||| | || |||| | || ||||| || ||||||| | | | || | Sbjct 223130 CTGACCAACAACGTCTGATTTTTGCTGGTAAACAGCTGGAAGATGGCCGCACCCTGAGTG 223071 Query 25347 ATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 | ||||| ||||| |||||||||||| ||||||| ||||| Sbjct 223070 ACTACAACATTCAGAAAGAATCCACCCTTCATTTGGTGTT 223031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445073091105600