Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq3215 122 5e-23 seq304 116 2e-21 >seq3215 Length=281622 Score = 122 bits (134), Expect = 5e-23 Identities = 166/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||||||||||||| || ||| || || |||||||| || || || || || Sbjct 223025 AGACGCAACACCAAATGAAGGGTGGATTCTTTCTGAATGTTGTAGTCACTCAGGGTGCGG 223084 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| || |||||||| ||||| || | ||| |||||||| || || | ||||| Sbjct 223085 CCATCTTCCAGCTGTTTACCAGCAAAAATCAGACGTTGTTGGTCAGGTGGTATCCCCTCT 223144 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCT--TCGCTCTCCACTTCCACGG 34666 |||||| ||||| || | | ||| || ||| | ||||| || || | || Sbjct 223145 TTGTCTTGAATCTTGGCCTTCACATTTTCAATGGTATCTGATGGCTCT--ACCTCAAGGG 223202 Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGTA 34716 | || || || || || || || |||||||||||||||||||||||| || Sbjct 223203 TAATGGTCTTCCCAGTCAAAGTCTTCACAAAAATCTGCATGTTGATTCTA 223252 >seq304 Length=94255 Score = 116 bits (128), Expect = 2e-21 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||||||||||||| || || || || |||||||| || || || || || Sbjct 377 AGACGCAACACCAAATGAAGGGTAGATTCTTTCTGAATGTTGTAGTCACTCAGGGTGCGT 436 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| || |||||||| ||||| || | ||| |||||||| || || | ||||| Sbjct 437 CCATCTTCCAGCTGTTTACCAGCAAAAATCAGACGTTGTTGGTCAGGTGGTATCCCCTCT 496 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCT--TCGCTCTCCACTTCCACGG 34666 |||||| ||||| || | | ||| || ||| | ||||| || || | || Sbjct 497 TTGTCTTGAATCTTGGCCTTCACATTTTCAATGGTATCTGATGGCTCT--ACCTCAAGGG 554 Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGTA 34716 | || || || || || || || |||||||||||||||||||||||| || Sbjct 555 TAATGGTCTTCCCAGTCAAAGTCTTCACAAAAATCTGCATGTTGATTCTA 604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314714909012390