Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= NC_029073.1 Length=141298 Score E Sequences producing significant alignments: (Bits) Value seq402 91.5 1e-13 >seq402 Length=536460 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/216 (71%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 49067 TAAATTGTTCTCTTGTTAATTCTACGTTAAAGCCTTGTATAGATTCTAATTTGTCAATTG 49126 ||||||| | | | | || | || |||| |||| | || | |||||| ||||| Sbjct 381361 TAAATTGATTTTTAGACAAATTTAAATTAATTCCTTTAAATGAATTTAATTTAGTAATTG 381302 Query 49127 TTCCTCCTGTGTGCCCTAAACCTCTACCTGACATTTTAGCAACAGG-AATACCCAA-AGA 49184 |||| ||||| | |||||| |||||| || | ||| |||| ||||||||| | Sbjct 381301 TTCCGCCTGTATATCCTAAAAATCTACCAGATAACTTAT-AACACTTAATACCCAATACT 381243 Query 49185 AGCAACCAATGGAGCAACGATTAAACTAATTTTATCGCCGACTCCACCTGTGGAATGTTT 49244 |||| ||||| || |||||| ||| |||||| || | || ||||| |||||||| Sbjct 381242 TTCAAC-AATGGCAAAAGTATTAAAGTAACTTTATCACCAATACCGCCTGTTGAATGTTT 381184 Query 49245 ATCTACTTTTACACCTTCGATTTTTGATAGGTCAAT 49280 ||||||||| | ||| || || ||| ||| ||||| Sbjct 381183 ATCTACTTTAAAACCATCTATATTTAATAAATCAAT 381148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003959274400