Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq3215 82.4 5e-11 >seq3215 Length=281622 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||||||||| |||| || ||||| || || || ||||| || || || ||||| Sbjct 220078 GACAAAGAAGGCATTCCCCCAGATCAGCAGCGTTTGATCTTTGCTGGGAAGCAGTTGGAA 220019 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | |||| |||| ||| |||||||| || |||||| |||| | ||| | || || Sbjct 220018 GATGGTCGCACCTTGAGCGACTACAACATTCAGAAAGAGTCCACTCTCCATCTTGTGCTG 219959 Query 28003 CGTTTGCGTGGCGGC 28017 ||| | ||||| ||| Sbjct 219958 CGTCTCCGTGGTGGC 219944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355845789010410