Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq159 138 1e-27 >seq159 Length=112901 Score = 138 bits (152), Expect = 1e-27 Identities = 151/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 4931 TACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATAT 4990 ||| || ||||| || || || || ||||| || ||||| || ||||| |||||||| || Sbjct 34589 TACCAAATTTTCATTGACAATGCCATCACTAGCAGCAAAGAAGGCCAATACATGAGAAAT 34648 Query 4991 AAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAAC 5050 ||| | | ||| || ||||| || || | |||||| || ||||||| | ||| || Sbjct 34649 AAAATGTTTTTCCTCTGGCTTCAGCTTCTCCCAGTGTCCTAAGTCTTTAGAAAGATCTAC 34708 Query 5051 TTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATA 5110 ||||||| |||||||||| || || || |||||||||||||| ||| || || |||| Sbjct 34709 TTCTTCAGCAGTCCAAAAAGATGCCTCTGCTTTTTTGTACATTTTCCAGATGTCTTGATA 34768 Query 5111 CTGAATCGGAAGTATGACAAA 5131 | || |||| |||||||| Sbjct 34769 TTTTATAGGAAAAATGACAAA 34789 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 4818 ATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGA 4877 |||||||||||||| || | ||| ||||||||||| || || ||||| || ||||| || Sbjct 34318 ATATAAGTGTCTATAAGCAAGCTGTACATTTCAGAGTGAATGTTTTCAATTGCAATTTGG 34377 Query 4878 AATCCGTAAAAGCATCTAGCTTCTGT 4903 ||||| || ||||| ||||| ||||| Sbjct 34378 AATCCATAGAAGCACCTAGCCTCTGT 34403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427029666125390