Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24]
3,830 sequences; 425,494,968 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq3215 118 8e-22
seq3547 82.4 5e-11
>seq3215
Length=281622
Score = 118 bits (130), Expect = 8e-22
Identities = 156/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGT 44183
|| ||| || || || ||| ||| || || |||||||| ||| | || || || | |
Sbjct 219959 CAGCACAAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCGCTCAAGGTG-CGACCAT 220017
Query 44184 CGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTT 44243
| |||| ||||||||| ||||||||||||||||||||||||| || | ||||| || |
Sbjct 220018 CTTCCAACTGCTTCCCAGCAAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCTTTGT 220077
Query 44244 CCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303
| ||||| ||||| || | ||||| || | || || ||||||| || || |
Sbjct 220078 CTTGGATCTTGGCCTTCACATTTTCAATGGTATCTGAGGGCTCTACCTCCAGGGTGATGG 220137
Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || ||||| || || || ||||| |||||
Sbjct 220138 TCTTGCCTGTGAGAGTTTTGACAAAGATCTGCAT 220171
>seq3547
Length=186543
Score = 82.4 bits (90), Expect = 5e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| | ||| || ||| |||||| ||||||||||| ||| ||| ||| | || ||
Sbjct 88952 CACTAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGACCATCCTC 89011
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
|||||||| || |||||||||||||||||||| ||||
Sbjct 89012 AAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTG 89049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359973596323110
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |