Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq3215 127 5e-24 >seq3215 Length=281622 Score = 127 bits (140), Expect = 5e-24 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || |||||||||||||| || || |||||||| ||||| || |||||| Sbjct 220168 CAGATCTTTGTCAAAACTCTCACAGGCAAGACCATCACCCTGGAGGTAGAGCCCTCAGAT 220109 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || ||||| || ||||||||||| || || || || ||||| Sbjct 220108 ACCATTGAAAATGTGAAGGCCAAGATCCAAGACAAAGAAGGCATTCCCCCAGATCAGCAG 220049 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||| || || || ||| | |||||||| | || |||| ||| || ||| | Sbjct 220048 CGTTTGATCTTTGCTGGGAAGCAGTTGGAAGATGGTCGCAC-CTTGAGCGACTACAACAT 219990 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 || ||||| || || || |||||||| Sbjct 219989 TCAGAAAGAGTCCACTCTCCATCTTGT 219963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203672130653020