Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3867 100 6e-16 seq3694 100 6e-16 seq3590 100 6e-16 seq3282 100 6e-16 seq2772 100 6e-16 seq2665 100 6e-16 seq2588 100 6e-16 seq1627 100 6e-16 seq598 100 6e-16 seq1 100 6e-16 >seq3867 Length=17068 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 8506 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 8565 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 8566 CCCCACGTTGGGC 8578 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 16641 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 16700 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 16701 CCCCACGTTGGGC 16713 >seq3694 Length=17353 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 376 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 317 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 316 CCCCACGTTGGGC 304 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 2362 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 2303 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 2302 CCCCACGTTGGGC 2290 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 12063 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 12004 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 12003 CCCCACGTTGGGC 11991 >seq3590 Length=35001 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 8398 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 8457 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 8458 CCCCACGTTGGGC 8470 >seq3282 Length=56268 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 15954 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 16013 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 16014 CCCCACGTTGGGC 16026 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 23642 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 23701 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 23702 CCCCACGTTGGGC 23714 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 42826 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 42885 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 42886 CCCCACGTTGGGC 42898 >seq2772 Length=47978 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 31898 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 31839 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 31838 CCCCACGTTGGGC 31826 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 40515 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 40456 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 40455 CCCCACGTTGGGC 40443 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 47139 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 47080 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 47079 CCCCACGTTGGGC 47067 >seq2665 Length=9423 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 8889 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 8948 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 8949 CCCCACGTTGGGC 8961 >seq2588 Length=2421381 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 27124 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 27183 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 27184 CCCCACGTTGGGC 27196 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 51914 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 51973 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 51974 CCCCACGTTGGGC 51986 >seq1627 Length=328014 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 17604 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 17545 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 17544 CCCCACGTTGGGC 17532 >seq598 Length=36558 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 773 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 714 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 713 CCCCACGTTGGGC 701 >seq1 Length=9386848 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 1251270 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 1251211 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 1251210 CCCCACGTTGGGC 1251198 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 1403675 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 1403734 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 1403735 CCCCACGTTGGGC 1403747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057763429989470