Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2445 95.1 1e-14 seq3036 89.7 5e-13 >seq2445 Length=2603117 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || |||||||||||| | || || ||| | | Sbjct 1149635 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCA 1149576 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | ||| |||| | ||||||| || ||||| || || ||| | ||||| Sbjct 1149575 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCAA 1149516 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTACA 40867 ||| || | |||| || || ||||| |||| || | || ||| ||| ||||||| Sbjct 1149515 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCA--GACTACA 1149458 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 | ||||| || || |||| || ||||| || ||| | || || || ||| Sbjct 1149457 ATATCCAAAAAGAATCCACTCTCCATCTTGTATTGAGATTAAGAGGAGGC 1149408 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || |||||||||||| | || || ||| | | Sbjct 1078273 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCT 1078214 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | ||| |||| | ||||||| || ||||| || || ||| | ||||| Sbjct 1078213 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCAA 1078154 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTACA 40867 ||| || | |||| || || ||||| |||| || | || ||| ||| ||||||| Sbjct 1078153 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCA--GACTACA 1078096 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||||||| || || |||| || ||||| || || Sbjct 1078095 ACATCCAAAAAGAATCCACTCTCCATCTTGTATT 1078062 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || |||||||||||| | || || ||| | | Sbjct 1078501 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCT 1078442 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | ||| |||| | ||||||| || ||||| || || ||| | ||||| Sbjct 1078441 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCAA 1078382 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTACA 40867 ||| || | |||| || || ||||| |||| || | || ||| ||| ||||||| Sbjct 1078381 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCA--GACTACA 1078324 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||||||| || || |||| || ||||| || || Sbjct 1078323 ACATCCAAAAAGAATCCACTCTCCATCTGGTATT 1078290 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || |||||||||||| | || || ||| | | Sbjct 1078957 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCT 1078898 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | ||| |||| | ||||||| || ||||| || || ||| | || || Sbjct 1078897 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGATCAA 1078838 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTACA 40867 |||||| | |||| || || ||||| |||| || | || ||| ||| ||||||| Sbjct 1078837 CAACGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCA--GACTACA 1078780 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||||||| || || |||| || ||||| || || Sbjct 1078779 ACATCCAAAAAGAATCCACTCTCCATCTGGTATT 1078746 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || |||||||||||| | || || ||| | | Sbjct 1149863 ATGCAGATTTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACCAGCT 1149804 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | ||| |||| | ||||||| || ||||| || || ||| | ||||| Sbjct 1149803 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCAA 1149744 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTACA 40867 ||| || | |||| || || ||||| |||| || | || ||| ||| ||||||| Sbjct 1149743 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCA--GACTACA 1149686 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||||||| || || |||| || ||||| || || Sbjct 1149685 ACATCCAAAAAGAATCCACTCTCCATCTTGTATT 1149652 Score = 89.7 bits (98), Expect = 5e-13 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || | || || |||||||||||| | || || ||| | | Sbjct 1079186 AATGCAGATCTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACCAGC 1079127 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | ||| | || ||||||| |||||||| || || ||| | ||||| Sbjct 1079126 TGATACCATTGAAAATGTTAAAACTAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCA 1079067 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTAC 40866 ||| || | |||| || || ||||| |||| || | || ||| ||| |||||| Sbjct 1079066 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCA--GACTAC 1079009 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 |||||||| || || |||| || ||||| || || Sbjct 1079008 AACATCCAAAAAGAATCCACTCTCCATCTTGTATT 1078974 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/216 (69%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || | || || |||||||||||| | || || ||| | | Sbjct 1150092 AATGCAGATCTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACCAGC 1150033 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | ||| | || ||||||| |||||||| || || ||| | ||||| Sbjct 1150032 TGATACCATTGAAAATGTTAAAACTAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCA 1149973 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTAC 40866 ||| || | |||| || || ||||| |||| || | || ||| ||| |||||| Sbjct 1149972 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCA--GACTAC 1149915 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||||||| || || | || || ||||| || ||| Sbjct 1149914 AACATCCAAAAAGAATCAACTCTCCATCTTGTATTG 1149879 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || ||||||||||| | || || ||| | | Sbjct 1078729 ATGCAGATCTTCGTCAAGACACTGACTGGTAAAACCATCACTCTGGAAGTTGAACCAGCT 1078670 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | ||| |||| | ||||||| || ||||| || || ||| | ||||| Sbjct 1078669 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCAA 1078610 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| || | |||| || || ||||| |||| || | | || || ||||||||| Sbjct 1078609 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACGCTTTCAGACTACAAC 1078550 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||||| || || | || || ||||| || || Sbjct 1078549 ATCCAAAAAGAATCAACTCTCCATCTTGTATT 1078518 >seq3036 Length=1877736 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || || ||||||||| |||| || ||| | | Sbjct 1771928 ATGCAGATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTCGAAGTAGAACCAGCT 1771869 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | ||| | || | || || | || || || || || ||| | || ||| Sbjct 1771868 GATACCATTGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGAATTCCCCCAGATCAG 1771809 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || |||| || || ||||| || || || | | |||||| || |||||| Sbjct 1771808 CAACGTCTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCTCTCTGATTACAAC 1771749 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| || | || || ||||| || | || ||||| || || Sbjct 1771748 ATCCAGAAAGAATCGACACTCCATCTTGTACTTCGATTGAGAGGAGG 1771702 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || || ||||||||| |||| || ||| | | Sbjct 1772156 ATGCAGATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTCGAAGTAGAACCAGCT 1772097 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | ||| | || | || || | || || || || || ||| | || ||| Sbjct 1772096 GATACCATTGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGAATTCCCCCAGATCAG 1772037 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || |||| || || ||||| || || || | | |||||| || |||||| Sbjct 1772036 CAACGTCTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCTCTCTGATTACAAC 1771977 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| || | || || ||||| || | || ||||| || || Sbjct 1771976 ATCCAGAAAGAATCGACACTCCATCTTGTACTTCGATTGAGAGGAGG 1771930 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || || ||||||||| |||| || ||| | | Sbjct 1839274 ATGCAGATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTCGAAGTAGAACCAGCT 1839215 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | ||| | || | || || | || || || || || ||| | || ||| Sbjct 1839214 GATACCATTGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGAATTCCCCCAGATCAG 1839155 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || |||| || || ||||| || || || | | |||||| || |||||| Sbjct 1839154 CAACGTCTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCTCTCTGATTACAAC 1839095 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| || | || || ||||| || | || ||||| || || Sbjct 1839094 ATCCAGAAAGAATCGACACTCCATCTTGTACTTCGATTGAGAGGAGG 1839048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515190418567440