Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq1613 136 7e-27 seq3007 123 5e-23 >seq1613 Length=3625785 Score = 136 bits (150), Expect = 7e-27 Identities = 255/371 (69%), Gaps = 8/371 (2%) Strand=Plus/Minus Query 51828 AGGTTATAGTTATGTTTGCCAGCCTATAGATTATTCAGATAACGTTCACGAGGTTAGGAT 51887 ||| ||||||||| | ||||| || | |||| || || | | | || | || || Sbjct 2860075 AGGATATAGTTATTTGTGCCAACCAGTGAGTTATACATATGATCATAATGAAATGAGAAT 2860016 Query 51888 AGCCAGAGCATTATGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATT 51947 ||||| ||||| |||| || ||| | || |||| | |||| || || || || || Sbjct 2860015 AGCCAAGGCATTGTGGTGGTTTTATTTCTCTAAAGTGCTAGAGATGTTAGACACTGTGTT 2859956 Query 51948 TTTCAT---ACTTAGGAAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTT 52004 ||| || || || |||||| ||| || ||||||||||| || || || |||||| Sbjct 2859955 TTTTATTTTACGTAAGAAAAA---TAACCAAGTTAGTTTTCTTCATGTTTACCATCATGC 2859899 Query 52005 TACTATGTTTACTCTAGGATGGATAGGTATTAAATGGTTTGCTGGAGGTCAGGCATTTTT 52064 || |||||| || | | ||||| || || |||||| | || ||||||||| | || || Sbjct 2859898 AACCATGTTTCCTATTTGGTGGATTGGAATCAAATGGGTAGCAGGAGGTCAGTCTTTCTT 2859839 Query 52065 TGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGTATGGCCG- 52123 ||| || | | || || || || ||||| | |||||||| || || || | | | Sbjct 2859838 TGGGGCCATGATGAACTCCTTCATACATGTATTGATGTACACCTACTACGGAGTTTCTGC 2859779 Query 52124 CTTGTGGTCCTATGTTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTATAATGCAGT 52183 ||| || | | ||||| |||||| ||||||||||| | || || || | ||| || Sbjct 2859778 CTTAGGGCCACAATTTCAG-AAGTATTTATGGTGGAAAAGATACCTGACAAAAATCCAAC 2859720 Query 52184 TGGTACAGTTC 52194 || |||||| Sbjct 2859719 TGACTCAGTTC 2859709 >seq3007 Length=1849679 Score = 123 bits (136), Expect = 5e-23 Identities = 98/118 (83%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 189623 GTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCGATA 189682 |||||||||||||||||||| || ||| |||| ||| || |||||||||||||| ||| Sbjct 1445232 GTAGGTTGTATGTGGTCTATATGTGGAATACATGATCAAGGTTGGAAAGAAAGACCTATA 1445173 Query 189683 TTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTTGATGTTGCTG 189740 ||||| || |||||||| ||||||||| | | | ||||| ||||||||||| |||| Sbjct 1445172 TTTGGTAAAATAAGATACATGAATTATCAAGGATGTAAGAGAAAATTTGATGTAGCTG 1445115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923145227918760