Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq2445 134 1e-26 >seq2445 Length=2603117 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 |||||||| ||||| || || | ||| || ||| |||||||| ||||| || || | Sbjct 1149409 CCTCCTCTTAATCTCAATACAAGATGGAGAGTGGATTCTTTTTGGATATTGTAGTC-TGA 1149467 Query 43955 AATTGA-CGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || | |||| ||||||||||| || ||||| ||||| | ||| ||||| | || Sbjct 1149468 AAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGG 1149527 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||||||| |||||| |||||| | ||| |||||||| || || || Sbjct 1149528 AATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCTGCTGGTTCAAC 1149587 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || |||||||| || |||||||| || || || ||||| Sbjct 1149588 TTCAAGGGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1149635 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 |||||||| |||||||| |||| ||| || ||| |||||||| || || || || Sbjct 1078274 ACCTCCTCGTAATCTTAATACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGA 1078333 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | | |||| ||||||||||| || ||||| ||||| | ||| ||||| | || Sbjct 1078334 TAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGG 1078393 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||||||| |||||| |||||| | ||| ||||| || || || || Sbjct 1078394 AATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCAAC 1078453 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || |||||||| || |||||||| || || || ||||| Sbjct 1078454 TTCAAGGGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078501 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 |||||||| |||||||| |||| ||| || ||| |||||||| || || || || Sbjct 1078730 ACCTCCTCGTAATCTTAATACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGA 1078789 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | | |||| ||||||||||| || ||||| ||||| ||||| || || | || Sbjct 1078790 TAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCTGGGGG 1078849 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||||||| |||||| |||||| | ||| ||||| || || || || Sbjct 1078850 AATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCAAC 1078909 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || |||||||| || |||||||| || || || ||||| Sbjct 1078910 TTCAAGGGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078957 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| |||||||| || | ||| || ||| |||||||| || || || || | Sbjct 1078047 CCTCCTCGTAATCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGAT 1078106 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 | | | |||| ||||||||||| || ||||| ||||| | ||| ||||| | || Sbjct 1078107 AGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGA 1078166 Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074 | ||||||||||||| |||||| |||||| | ||| ||||| || || || || Sbjct 1078167 ATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCAACT 1078226 Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || |||||||| || |||||||| || || || ||||| Sbjct 1078227 TCAAGGGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078273 Score = 122 bits (134), Expect = 6e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 |||||||| |||||||| || | ||| || ||| |||||||| || || || || | Sbjct 1149636 ACCTCCTCGTAATCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTC-TG 1149694 Query 43954 TAATTGA-CGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012 || || | |||| ||||||||||| || ||||| ||||| | ||| ||||| | | Sbjct 1149695 AAAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGG 1149754 Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072 | | ||||||||||||| |||||| |||||| | ||| ||||| || || || | Sbjct 1149755 GAATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCTA 1149814 Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || | || || |||||||| || || ||||| || || || ||||| Sbjct 1149815 CCTCTAAGGTGATGGTTTTACCAGTCAATGTCTTGACGAAAATCTGCAT 1149863 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 |||||||| |||||||| || | ||| || ||| |||||||| || || || || | Sbjct 1078958 ACCTCCTCGTAATCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTC-TG 1079016 Query 43954 TAATTGA-CGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012 || || | |||| ||||||||||| || ||||| ||||| | ||| ||||| | | Sbjct 1079017 AAAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGG 1079076 Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072 | | ||||||||| ||| |||||| ||| || | ||| ||||| || || || | Sbjct 1079077 GAATACCTTCTTTGTCTTGAATTTTAGTTTTAACATTTTCAATGGTATCAGCTGGTTCTA 1079136 Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || | || || |||||||| || || ||||| || || || ||||| Sbjct 1079137 CCTCTAAGGTGATGGTTTTACCAGTCAATGTCTTGACGAAGATCTGCAT 1079185 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 |||||||| |||||||| || | ||| || || |||||||| || || || || | Sbjct 1078502 ACCTCCTCGTAATCTTAATACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAGTC-TG 1078560 Query 43954 TAATTGA-CGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012 || | | |||| ||||||||||| || ||||| ||||| | ||| ||||| | | Sbjct 1078561 AAAGCGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGG 1078620 Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072 | | ||||||||||||| |||||| |||||| | ||| ||||| || || || | Sbjct 1078621 GAATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCAA 1078680 Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || | || || |||||||| || | ||||| || || || ||||| Sbjct 1078681 CTTCCAGAGTGATGGTTTTACCAGTCAGTGTCTTGACGAAGATCTGCAT 1078729 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 |||||||| ||||| || || | ||| || || |||||||| || || || || | Sbjct 1149864 ACCTCCTCGTAATCTCAATACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAGTC-TG 1149922 Query 43954 TAATTGA-CGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012 || || | |||| ||||||||||| || ||||| ||||| | ||| ||||| | | Sbjct 1149923 AAAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGG 1149982 Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072 | | ||||||||| ||| |||||| ||| || | ||| ||||| || || || | Sbjct 1149983 GAATACCTTCTTTGTCTTGAATTTTAGTTTTAACATTTTCAATGGTATCAGCTGGTTCTA 1150042 Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || | || || |||||||| || || ||||| || || || ||||| Sbjct 1150043 CCTCTAAGGTGATGGTTTTACCAGTCAATGTCTTGACGAAGATCTGCAT 1150091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354758276705412