Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq2153 102 7e-17 >seq2153 Length=2898250 Score = 102 bits (112), Expect = 7e-17 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 12961 ACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATC 13020 ||| ||||| || | ||| ||||||||||| ||||| || || || || ||||| | ||| Sbjct 642128 ACAGCCTAAGTCGACTAATAATCTGTCAGCTACAAATTCAATATATTGCTTCATGAGATC 642187 Query 13021 ACAGTTCATTCCTATTAATTTTACA-GGCATAGCTTCTGTTAAAAAGtttttttCTATAT 13079 ||||||||| || ||||| |||||| || | ||| || |||||||| | || ||| || | Sbjct 642188 ACAGTTCATACCAATTAA-TTTACATGGTAAAGCATCAGTTAAAAATTCTTGTTCAATTT 642246 Query 13080 CAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCT 13139 ||||| || ||| ||| | ||| | || | || | |||| || ||| Sbjct 642247 GTACTGCATCAGTAATTATACCATAAATTCTTTCCTGTGATAGCTTATTTACTAAATGTC 642306 Query 13140 TAAACATCATACATGCAAAATCACAGTG 13167 | |||| | ||| ||||||||||| || Sbjct 642307 TGTACATTAAACAGGCAAAATCACAATG 642334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430958926139538