Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2445 127 2e-24 >seq2445 Length=2603117 Score = 127 bits (140), Expect = 2e-24 Identities = 170/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 || |||||| | || || || ||||| ||||| ||| | |||||| | || ||||| | Sbjct 1150095 CAGAATGCAGATCTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACC 1150036 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 | || ||||| || | || ||| || ||| ||||||||||| || || || || Sbjct 1150035 AGCTGATACCATTGAAAATGTTAAAACTAAAATTCAAGACAAAGAAGGTATTCCCCCAGA 1149976 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-ACGT-CAGCGAC 26942 ||||||||| | || | | || |||||| | ||||||| ||||| || | ||| || Sbjct 1149975 CCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAG--AC 1149918 Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||| ||||||||||| ||| ||||||| || ||||| | ||||||| Sbjct 1149917 TACAACATCCAAAAAGAATCAACTCTCCATCTTGTATTGAGATTACGAGGAGG 1149865 Score = 122 bits (134), Expect = 8e-23 Identities = 169/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 || |||||| | || || || ||||| ||||| ||| | |||||| | || ||||| | Sbjct 1079189 CAGAATGCAGATCTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACC 1079130 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 | || ||||| || | || ||| || ||| ||||||||||| || || || || Sbjct 1079129 AGCTGATACCATTGAAAATGTTAAAACTAAAATTCAAGACAAAGAAGGTATTCCCCCAGA 1079070 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-ACGT-CAGCGAC 26942 ||||||||| | || | | || |||||| | ||||||| ||||| || | ||| || Sbjct 1079069 CCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAG--AC 1079012 Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||| ||||||||||| ||| ||||||| || | ||| | ||||||| Sbjct 1079011 TACAACATCCAAAAAGAATCCACTCTCCATCTTGTATTAAGATTACGAGGAGG 1078959 Score = 120 bits (132), Expect = 3e-22 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || ||||| ||| | |||||| | ||| | ||| || Sbjct 1078501 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCT 1078442 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | |||||| || ||| || |||||||| || || || || ||| Sbjct 1078441 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCAA 1078382 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-ACG-TCAGCGACTATA 26946 |||||| | || | | || |||||| | ||||||| ||||| || |||| |||| | Sbjct 1078381 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCAG--ACTACA 1078324 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||| ||||||||||| ||| |||||||||| | ||| | ||||||| Sbjct 1078323 ACATCCAAAAAGAATCCACTCTCCATCTGGTATTAAGATTACGAGGAGG 1078275 Score = 120 bits (132), Expect = 3e-22 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || ||||| ||| | |||||| | ||| | ||| || Sbjct 1078957 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCT 1078898 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | |||||| || ||| || |||||||| || || || |||||| Sbjct 1078897 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGATCAA 1078838 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-ACG-TCAGCGACTATA 26946 ||| || | || | | || |||||| | ||||||| ||||| || |||| |||| | Sbjct 1078837 CAACGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCAG--ACTACA 1078780 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||| ||||||||||| ||| |||||||||| | ||| | ||||||| Sbjct 1078779 ACATCCAAAAAGAATCCACTCTCCATCTGGTATTAAGATTACGAGGAGG 1078731 Score = 120 bits (132), Expect = 3e-22 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || ||||| ||| | |||||| | ||| | ||| || Sbjct 1149635 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCA 1149576 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | |||||| || ||| || |||||||| || || || || ||| Sbjct 1149575 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCAA 1149516 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-ACGT-CAGCGACTATA 26946 |||||| | || | | || |||||| | ||||||| ||||| || | ||| |||| | Sbjct 1149515 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAG--ACTACA 1149458 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 | || ||||||||||| ||| ||||||| || ||||| | |||||||| Sbjct 1149457 ATATCCAAAAAGAATCCACTCTCCATCTTGTATTGAGATTAAGAGGAGG 1149409 Score = 120 bits (132), Expect = 3e-22 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || ||||| ||||| ||| | |||||| | || ||||| || Sbjct 1149863 ATGCAGATTTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACCAGCT 1149804 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | |||||| || ||| || |||||||| || || || || ||| Sbjct 1149803 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCAA 1149744 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-ACGT-CAGCGACTATA 26946 |||||| | || | | || |||||| | ||||||| ||||| || | ||| |||| | Sbjct 1149743 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAG--ACTACA 1149686 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||| ||||||||||| ||| ||||||| || | ||| | ||||||| Sbjct 1149685 ACATCCAAAAAGAATCCACTCTCCATCTTGTATTAAGATTACGAGGAGG 1149637 Score = 114 bits (126), Expect = 1e-20 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || ||||| ||| | |||||| | ||| | ||| || Sbjct 1078273 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCT 1078214 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | |||||| || ||| || |||||||| || || || || ||| Sbjct 1078213 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCAA 1078154 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-ACG-TCAGCGACTATA 26946 |||||| | || | | || |||||| | ||||||| ||||| || |||| |||| | Sbjct 1078153 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCAG--ACTACA 1078096 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||| ||||||||||| ||| ||||||| || | ||| | ||||||| Sbjct 1078095 ACATCCAAAAAGAATCCACTCTCCATCTTGTATTAAGATTACGAGGAGG 1078047 Score = 109 bits (120), Expect = 5e-19 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || ||| | ||||| ||| | ||||| | ||| | ||| || Sbjct 1078729 ATGCAGATCTTCGTCAAGACACTGACTGGTAAAACCATCACTCTGGAAGTTGAACCAGCT 1078670 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | |||||| || ||| || |||||||| || || || || ||| Sbjct 1078669 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCAA 1078610 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACG---TCAGCGACTAT 26945 |||||| | || | | || |||||| | ||||||| ||||| || |||| |||| Sbjct 1078609 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAA-CGCTTTCAG--ACTAC 1078553 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||||||||||| ||| ||||||| || | ||| | ||||||| Sbjct 1078552 AACATCCAAAAAGAATCAACTCTCCATCTTGTATTAAGATTACGAGGAGG 1078503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478635660721680