Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq2445 111 1e-19 seq1919 89.7 4e-13 >seq2445 Length=2603117 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || ||||| || | || || |||||||| ||| | ||| || ||||| Sbjct 1078501 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAA-CCAGC 1078443 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || ||| |||||| ||||||||||| | ||| || || Sbjct 1078442 TGATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCA 1078383 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | || | ||| || |||||||| ||||||| | ||| | | || || || Sbjct 1078382 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCAGACTACAA 1078323 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| |||||||| || ||| | ||| |||| || ||||| |||||||| Sbjct 1078322 CATCCAAAAAGAATCCACTCTCCATCTGGTATTAAGATTACGAGGAGG 1078275 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || ||||| || | || || |||||||| ||| | ||| || ||||| Sbjct 1078957 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAA-CCAGC 1078899 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || ||| |||||| ||||||||||| | ||| ||||| Sbjct 1078898 TGATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGATCA 1078839 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || | || | ||| || |||||||| ||||||| | ||| | | || || || Sbjct 1078838 ACAACGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCAGACTACAA 1078779 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| |||||||| || ||| | ||| |||| || ||||| |||||||| Sbjct 1078778 CATCCAAAAAGAATCCACTCTCCATCTGGTATTAAGATTACGAGGAGG 1078731 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || ||||| || | || || |||||||| ||| | ||| || ||||| Sbjct 1078273 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAA-CCAGC 1078215 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || ||| |||||| ||||||||||| | ||| || || Sbjct 1078214 TGATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCA 1078155 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | || | ||| || |||||||| ||||||| | ||| | | || || || Sbjct 1078154 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCAGACTACAA 1078095 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| |||||||| || ||| | ||| | || || ||||| |||||||| Sbjct 1078094 CATCCAAAAAGAATCCACTCTCCATCTTGTATTAAGATTACGAGGAGG 1078047 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || ||||| || || || || |||||||| || | ||| || ||||| Sbjct 1078729 ATGCAGATCTTCGTCAAGACACTGACTGGTAAAACCATCACTCTGGAAGTTGAA-CCAGC 1078671 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || ||| |||||| ||||||||||| | ||| || || Sbjct 1078670 TGATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCA 1078611 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | || | ||| || |||||||| ||||||| | ||| | | || || || Sbjct 1078610 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACGCTTTCAGACTACAA 1078551 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| |||||||| || ||| | ||| | || || ||||| |||||||| Sbjct 1078550 CATCCAAAAAGAATCAACTCTCCATCTTGTATTAAGATTACGAGGAGG 1078503 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||| ||||| || | || || |||||||| ||| | || || ||||| Sbjct 1149863 ATGCAGATTTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAA-CCAGC 1149805 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || ||| |||||| ||||||||||| | ||| || || Sbjct 1149804 TGATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCA 1149745 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | || | ||| || |||||||| ||||||| | ||| | | || || || Sbjct 1149744 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTACAA 1149685 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| |||||||| || ||| | ||| | || || ||||| |||||||| Sbjct 1149684 CATCCAAAAAGAATCCACTCTCCATCTTGTATTAAGATTACGAGGAGG 1149637 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || ||||| || | || || |||||||| ||| | ||| || ||||| Sbjct 1149635 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAA-CCAGC 1149577 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || ||| |||||| ||||||||||| | ||| || || Sbjct 1149576 AGATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCA 1149517 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | || | ||| || |||||||| ||||||| | ||| | | || || || Sbjct 1149516 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTACAA 1149457 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || |||||||| || ||| | ||| | || |||||||| ||||||| Sbjct 1149456 TATCCAAAAAGAATCCACTCTCCATCTTGTATTGAGATTAAGAGGAGG 1149409 >seq1919 Length=159031 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||| || || |||||||| | || || || ||||| ||| | || || || Sbjct 44440 AAGATGCAGATCTTCGTCAAAACATTGACTGGTAAGACCATCACCTTAGAGGTCGAA-CC 44382 Query 115343 AGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 ||| || || | | | | || ||| || ||| |||||||||||| | || || Sbjct 44381 AGCTGATACCATAGAAAATGTCAAAGCCAAGATTCAAGATAAAGAAGGCATTCCACCAGA 44322 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 ||| || || | |||| ||| || || ||| | ||||||| || ||| | | ||||| Sbjct 44321 TCAACAGCGATTGATTTTTGCTGGAAAGCAACTTGAAGATGGCAGAACTCTCTCGGATTA 44262 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| || ||||| || || | ||| |||| |||||||| || ||||| Sbjct 44261 CAACATCCAGAAAGAATCGACCCTCCATTTGGTATTGAGATTACGTGGAGG 44211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425320833240280