Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq3721 116 2e-21 seq3132 116 2e-21 seq2956 116 2e-21 seq2425 116 2e-21 seq2286 116 2e-21 seq2225 116 2e-21 seq1893 116 2e-21 seq3674 113 3e-20 seq3500 113 3e-20 seq1900 113 3e-20 seq2445 102 5e-17 seq480 102 5e-17 seq2523 95.1 8e-15 seq2834 86.0 4e-12 seq79 84.2 1e-11 >seq3721 Length=8495 Score = 116 bits (128), Expect = 2e-21 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 245 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCGT 186 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 185 GCAAGTATTTAGCCTTA 169 >seq3132 Length=35076 Score = 116 bits (128), Expect = 2e-21 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 34980 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCGT 34921 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 34920 GCAAGTATTTAGCCTTA 34904 >seq2956 Length=8510 Score = 116 bits (128), Expect = 2e-21 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 659 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCGT 718 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 719 GCAAGTATTTAGCCTTA 735 Score = 113 bits (124), Expect = 3e-20 Identities = 80/92 (87%), Gaps = 5/92 (5%) Strand=Plus/Plus Query 25905 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAA 25959 |||||||| |||||||| ||||||||||||||||||||| || ||||||||||| Sbjct 8002 CCCGTTCCTCCGGCTGTGGCTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 8061 Query 25960 TCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||| |||||||||||||||||||| ||||||| Sbjct 8062 TCCATTCATGCGCGTCACTAATTACATGACGA 8093 >seq2425 Length=81440 Score = 116 bits (128), Expect = 2e-21 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 37047 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCGT 37106 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 37107 GCAAGTATTTAGCCTTA 37123 Score = 116 bits (128), Expect = 2e-21 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 77057 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCGT 77116 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 77117 GCAAGTATTTAGCCTTA 77133 Score = 113 bits (124), Expect = 3e-20 Identities = 80/92 (87%), Gaps = 5/92 (5%) Strand=Plus/Plus Query 25905 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAA 25959 |||||||| |||||||| ||||||||||||||||||||| || ||||||||||| Sbjct 28449 CCCGTTCCTCCGGCTGTGGCTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 28508 Query 25960 TCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||| |||||||||||||||||||| ||||||| Sbjct 28509 TCCATTCATGCGCGTCACTAATTACATGACGA 28540 Score = 113 bits (124), Expect = 3e-20 Identities = 80/92 (87%), Gaps = 5/92 (5%) Strand=Plus/Plus Query 25905 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAA 25959 |||||||| |||||||| ||||||||||||||||||||| || ||||||||||| Sbjct 35556 CCCGTTCCTCCGGCTGTGGCTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 35615 Query 25960 TCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||| |||||||||||||||||||| ||||||| Sbjct 35616 TCCATTCATGCGCGTCACTAATTACATGACGA 35647 Score = 113 bits (124), Expect = 3e-20 Identities = 80/92 (87%), Gaps = 5/92 (5%) Strand=Plus/Plus Query 25905 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAA 25959 |||||||| |||||||| ||||||||||||||||||||| || ||||||||||| Sbjct 69946 CCCGTTCCTCCGGCTGTGGCTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 70005 Query 25960 TCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||| |||||||||||||||||||| ||||||| Sbjct 70006 TCCATTCATGCGCGTCACTAATTACATGACGA 70037 >seq2286 Length=8799 Score = 116 bits (128), Expect = 2e-21 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 7722 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCGT 7781 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 7782 GCAAGTATTTAGCCTTA 7798 >seq2225 Length=10643 Score = 116 bits (128), Expect = 2e-21 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 502 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCGT 443 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 442 GCAAGTATTTAGCCTTA 426 >seq1893 Length=61797 Score = 116 bits (128), Expect = 2e-21 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 325 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCGT 266 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 265 GCAAGTATTTAGCCTTA 249 >seq3674 Length=8576 Score = 113 bits (124), Expect = 3e-20 Identities = 80/92 (87%), Gaps = 5/92 (5%) Strand=Plus/Minus Query 25905 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAA 25959 |||||||| |||||||| ||||||||||||||||||||| || ||||||||||| Sbjct 8387 CCCGTTCCTCCGGCTGTGGCTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 8328 Query 25960 TCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||| |||||||||||||||||||| ||||||| Sbjct 8327 TCCATTCATGCGCGTCACTAATTACATGACGA 8296 >seq3500 Length=1761301 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct 1739989 CTCTCTCTTCAAAGTTATTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCGT 1740048 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 1740049 GCAAGTATTTAGCCTTA 1740065 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct 1759062 CTCTCTCTTCAAAGTTATTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCGT 1759121 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 1759122 GCAAGTATTTAGCCTTA 1759138 >seq1900 Length=3050221 Score = 113 bits (124), Expect = 3e-20 Identities = 80/92 (87%), Gaps = 5/92 (5%) Strand=Plus/Plus Query 25905 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAA 25959 |||||||| |||||||| ||||||||||||||||||||| || ||||||||||| Sbjct 875640 CCCGTTCCTCCGGCTGTGGCTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 875699 Query 25960 TCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||| |||||||||||||||||||| ||||||| Sbjct 875700 TCCATTCATGCGCGTCACTAATTACATGACGA 875731 >seq2445 Length=2603117 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| |||| || | || |||| ||| |||||| || ||||| || ||||| || | Sbjct 1078729 TACCTCCTCGTAATCTTAATACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTG 1078788 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | | || || |||||||| || ||||| || | ||||||||||| | || Sbjct 1078789 ATAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCTGGGG 1078848 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||||| || |||||| || ||||| | | ||||| | ||||| Sbjct 1078849 GAATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCAA 1078908 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | || || |||||||| ||||| || || ||||| |||||||| Sbjct 1078909 CTTCAAGGGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078957 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| |||| || | || || | ||| |||||| || ||||| || ||||| || | Sbjct 1078957 TACCTCCTCGTAATCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTG 1079016 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | | || || |||||||| || ||||| || | | |||||| || | || Sbjct 1079017 AAAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGG 1079076 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||| |||||| || ||||| | | ||||| | ||| | Sbjct 1079077 GAATACCTTCTTTGTCTTGAATTTTAGTTTTAACATTTTCAATGGTATCAGCTGGTTCTA 1079136 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| || || |||||||| ||||| || || ||||| |||||||| Sbjct 1079137 CCTCTAAGGTGATGGTTTTACCAGTCAATGTCTTGACGAAGATCTGCAT 1079185 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| |||| || | ||| || | ||| ||||| || ||||| || ||||| || | Sbjct 1149863 TACCTCCTCGTAATCTCAATACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCTG 1149922 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | | || || |||||||| || ||||| || | | |||||| || | || Sbjct 1149923 AAAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGG 1149982 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||| |||||| || ||||| | | ||||| | ||| | Sbjct 1149983 GAATACCTTCTTTGTCTTGAATTTTAGTTTTAACATTTTCAATGGTATCAGCTGGTTCTA 1150042 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| || || |||||||| ||||| || || ||||| |||||||| Sbjct 1150043 CCTCTAAGGTGATGGTTTTACCAGTCAATGTCTTGACGAAGATCTGCAT 1150091 >seq480 Length=4256419 Score = 102 bits (112), Expect = 5e-17 Identities = 58/59 (98%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2446915 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCG 2446973 >seq2523 Length=63094 Score = 95.1 bits (104), Expect = 8e-15 Identities = 66/75 (88%), Gaps = 5/75 (7%) Strand=Plus/Plus Query 25922 GGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGCGCGTCA 25976 || ||||||||||||||||||||| || |||||||||||||| ||||||||||||| Sbjct 54605 GGCTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCA 54664 Query 25977 CTAATTAGATGACGA 25991 ||||||| ||||||| Sbjct 54665 CTAATTACATGACGA 54679 >seq2834 Length=8488 Score = 86.0 bits (94), Expect = 4e-12 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 19950 TCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCG 19999 ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 172 TCTTTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCG 221 >seq79 Length=877743 Score = 84.2 bits (92), Expect = 1e-11 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 19957 AAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005 |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 758070 AAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGACTCG 758022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334928956786739