Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2445 131 1e-25 seq3036 102 7e-17 >seq2445 Length=2603117 Score = 131 bits (144), Expect = 1e-25 Identities = 169/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| |||||| ||||||| | ||||| || | || Sbjct 1078273 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCT 1078214 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || || |||| |||| |||| ||| || |||||||| ||||| || || Sbjct 1078213 GATACCATTGAAAATGTCA---AAGCTAAAATTCAA-GATAAAGAAGGTATTCCCCCAGA 1078158 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| | | || ||||| || |||||||| ||||||| | | || | || || Sbjct 1078157 CCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCAGACTA 1078098 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || |||||||||||||| || ||| | || |||| || ||||||| Sbjct 1078097 CAACATCCAAAAAGAATCCACTCTCCATCTTGTATTAAGATTACGAGGAGG 1078047 Score = 131 bits (144), Expect = 1e-25 Identities = 169/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| |||||| ||||||| | ||||| || | || Sbjct 1078501 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCT 1078442 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || || |||| |||| |||| ||| || |||||||| ||||| || || Sbjct 1078441 GATACCATTGAAAATGTCA---AAGCTAAAATTCAA-GATAAAGAAGGTATTCCCCCAGA 1078386 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| | | || ||||| || |||||||| ||||||| | | || | || || Sbjct 1078385 CCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCAGACTA 1078326 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || |||||||||||||| || ||| | || |||| || ||||||| Sbjct 1078325 CAACATCCAAAAAGAATCCACTCTCCATCTGGTATTAAGATTACGAGGAGG 1078275 Score = 131 bits (144), Expect = 1e-25 Identities = 169/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| |||||| ||||||| | ||||| || | || Sbjct 1078957 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCT 1078898 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || || |||| |||| |||| ||| || |||||||| ||||| || || Sbjct 1078897 GATACCATTGAAAATGTCA---AAGCTAAAATTCAA-GATAAAGAAGGTATTCCCCCAGA 1078842 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| || | || ||||| || |||||||| ||||||| | | || | || || Sbjct 1078841 TCAACAACGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCAGACTA 1078782 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || |||||||||||||| || ||| | || |||| || ||||||| Sbjct 1078781 CAACATCCAAAAAGAATCCACTCTCCATCTGGTATTAAGATTACGAGGAGG 1078731 Score = 131 bits (144), Expect = 1e-25 Identities = 169/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| |||||| ||||||| | ||||| || | | Sbjct 1149635 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCA 1149576 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || || |||| |||| |||| ||| || |||||||| ||||| || || Sbjct 1149575 GATACCATTGAAAATGTCA---AAGCTAAAATTCAA-GATAAAGAAGGTATTCCCCCAGA 1149520 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| | | || ||||| || |||||||| ||||||| | | || | || || Sbjct 1149519 CCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTA 1149460 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||| |||||||||||||| || ||| | || | || |||||||||| Sbjct 1149459 CAATATCCAAAAAGAATCCACTCTCCATCTTGTATTGAGATTAAGAGGAGG 1149409 Score = 122 bits (134), Expect = 8e-23 Identities = 167/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| |||||| ||||||| | || || || | || Sbjct 1149863 ATGCAGATTTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACCAGCT 1149804 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || || |||| |||| |||| ||| || |||||||| ||||| || || Sbjct 1149803 GATACCATTGAAAATGTCA---AAGCTAAAATTCAA-GATAAAGAAGGTATTCCCCCAGA 1149748 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| | | || ||||| || |||||||| ||||||| | | || | || || Sbjct 1149747 CCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTA 1149688 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || |||||||||||||| || ||| | || |||| || ||||||| Sbjct 1149687 CAACATCCAAAAAGAATCCACTCTCCATCTTGTATTAAGATTACGAGGAGG 1149637 Score = 120 bits (132), Expect = 3e-22 Identities = 167/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || ||||| ||||| |||||| ||||||| | || || || | | Sbjct 1079186 AATGCAGATCTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACCAGC 1079127 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||| || || || | || || | |||| ||| ||||||||||| ||||| || || Sbjct 1079126 TGATACCATTGAA--AATGTTAAAACTAAAATTCAA-GACAAAGAAGGTATTCCCCCAGA 1079070 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| | | || ||||| || |||||||| ||||||| | | || | || || Sbjct 1079069 CCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTA 1079010 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || |||||||||||||| || ||| | || |||| || ||||||| Sbjct 1079009 CAACATCCAAAAAGAATCCACTCTCCATCTTGTATTAAGATTACGAGGAGG 1078959 Score = 118 bits (130), Expect = 9e-22 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| |||||| ||||||| | ||||| || | || Sbjct 1078729 ATGCAGATCTTCGTCAAGACACTGACTGGTAAAACCATCACTCTGGAAGTTGAACCAGCT 1078670 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || || |||| |||| |||| ||| || |||||||| ||||| || || Sbjct 1078669 GATACCATTGAAAATGTCA---AAGCTAAAATTCAA-GATAAAGAAGGTATTCCCCCAGA 1078614 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| | | || ||||| || |||||||| ||||||| | | || | || || Sbjct 1078613 CCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACGCTTTCAGACTA 1078554 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || ||||||||||| || || ||| | || |||| || ||||||| Sbjct 1078553 CAACATCCAAAAAGAATCAACTCTCCATCTTGTATTAAGATTACGAGGAGG 1078503 Score = 111 bits (122), Expect = 1e-19 Identities = 165/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || ||||| ||||| |||||| ||||||| | || || || | | Sbjct 1150092 AATGCAGATCTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACCAGC 1150033 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||| || || || | || || | |||| ||| ||||||||||| ||||| || || Sbjct 1150032 TGATACCATTGAA--AATGTTAAAACTAAAATTCAA-GACAAAGAAGGTATTCCCCCAGA 1149976 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| | | || ||||| || |||||||| ||||||| | | || | || || Sbjct 1149975 CCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTA 1149916 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || ||||||||||| || || ||| | || | || || ||||||| Sbjct 1149915 CAACATCCAAAAAGAATCAACTCTCCATCTTGTATTGAGATTACGAGGAGG 1149865 >seq3036 Length=1877736 Score = 102 bits (112), Expect = 7e-17 Identities = 166/236 (70%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || ||||||| ||||||| || | || Sbjct 1771016 ATGCAGATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTCGAAGTAGAACCAGCT 1770957 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || | || |||| || | || || || ||||| ||||| || || Sbjct 1770956 GATACCATTGAA--AATGTAAAAGCTAAGATCCAA-GATAAGGAAGGAATTCCCCCAGAT 1770900 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || |||| ||||| || |||||| ||||||||| | || | |||||| Sbjct 1770899 CAGCAACGTCTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCTCTCTGATTAC 1770840 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 || ||||| ||||||||||| || ||| | || || | || ||||| ||||| || Sbjct 1770839 AACATTCAGAAAGAATCCACACTCCATCTTGTACTTCGACTGAGAGGTGGAAAATA 1770784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433304398384235