Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2153 140 4e-28 >seq2153 Length=2898250 Score = 140 bits (154), Expect = 4e-28 Identities = 179/245 (73%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534 ||| | ||||||||| || |||||||| || ||||| ||||||| | ||| || Sbjct 643480 TACCAAATTTTCATTCACAATACCATCACTGGCAGCAAAGAAAGCCAGGACATGTGAAAT 643539 Query 93535 AAAATGTTTCTCATCATCTTT--AAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCG 93592 || |||| || ||| ||| |||||| |||||| || |||||| || | || Sbjct 643540 GAAGTGTTGTTCTTCAGGTTTTAAAGCTT--CCCAATGAATTAAATCTTTAGACAAGTCA 643597 Query 93593 ACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGA 93652 |||||||| |||||||||| |||||||| |||||||||||||| | ||| || || | | Sbjct 643598 ACTTCTTCAGCAGTCCAAAATGATGCTTCAGCTTTTTTGTACATTTGCCAGATATCATCA 643657 Query 93653 TATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCTAGTTGT 93712 |||||||| || ||||| ||||| | || || || ||| | | ||| || ||| | | | Sbjct 643658 TATTGAATAGGGAATATTACAAATCTATGGGGATTTTCTCTCAATAATGGTTCTTGGTTT 643717 Query 93713 GGGTC 93717 || || Sbjct 643718 GGATC 643722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556829692363560