Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq2445 104 2e-17 >seq2445 Length=2603117 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || || ||||| || |||| || |||||||| ||| | ||| ||||| ||| Sbjct 1149635 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACC-AGC 1149577 Query 111247 -GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| | ||| | || ||| |||||| || |||||||| ||||| || || Sbjct 1149576 AGATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCA 1149517 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 |||||| | || | ||| || ||||||||||||||| || ||| | | || || || Sbjct 1149516 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTACAA 1149457 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTG 111399 ||| ||||||||||| || || ||| | || ||| Sbjct 1149456 TATCCAAAAAGAATCCACTCTCCATCTTGTATTG 1149423 Score = 104 bits (114), Expect = 2e-17 Identities = 157/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 111180 TTTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGA 111239 ||| | |||||| || || ||||| || |||| || |||||||| ||| | || || Sbjct 1150098 TTTCAGAATGCAGATCTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGA 1150039 Query 111240 ACCCAGC-GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCG 111298 ||| ||| ||| | ||| | || ||| |||||| ||||||||||| ||||| Sbjct 1150038 ACC-AGCTGATACCATTGAAAATGTTAAAACTAAAATTCAAGACAAAGAAGGTATTCCCC 1149980 Query 111299 TCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCG 111358 || |||||||| | || | ||| || ||||||||||||||| || ||| | | | Sbjct 1149979 CAGACCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAG 1149920 Query 111359 ATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTG 111399 | || || || ||||||||||| || || ||| | || ||| Sbjct 1149919 ACTACAACATCCAAAAAGAATCAACTCTCCATCTTGTATTG 1149879 Score = 102 bits (112), Expect = 7e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 111180 TTTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGA 111239 ||| | |||||| || || ||||| || |||| || |||||||| ||| | || || Sbjct 1079192 TTTCAGAATGCAGATCTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGA 1079133 Query 111240 ACCCAGC-GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCG 111298 ||| ||| ||| | ||| | || ||| |||||| ||||||||||| ||||| Sbjct 1079132 ACC-AGCTGATACCATTGAAAATGTTAAAACTAAAATTCAAGACAAAGAAGGTATTCCCC 1079074 Query 111299 TCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCG 111358 || |||||||| | || | ||| || ||||||||||||||| || ||| | | | Sbjct 1079073 CAGACCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAG 1079014 Query 111359 ATTATAATATACAAAAAGAATCTACACTACATTTAGTGTT 111398 | || || || ||||||||||| || || ||| | || || Sbjct 1079013 ACTACAACATCCAAAAAGAATCCACTCTCCATCTTGTATT 1078974 Score = 98.7 bits (108), Expect = 8e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || || ||||| || |||| || |||||||| ||| | ||| ||||| ||| Sbjct 1078273 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACC-AGC 1078215 Query 111247 -GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| | ||| | || ||| |||||| || |||||||| ||||| || || Sbjct 1078214 TGATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCA 1078155 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 |||||| | || | ||| || ||||||||||||||| || ||| | | || || || Sbjct 1078154 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCAGACTACAA 1078095 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTT 111398 || ||||||||||| || || ||| | || || Sbjct 1078094 CATCCAAAAAGAATCCACTCTCCATCTTGTATT 1078062 Score = 98.7 bits (108), Expect = 8e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || || ||||| || |||| || |||||||| ||| | ||| ||||| ||| Sbjct 1078501 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACC-AGC 1078443 Query 111247 -GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| | ||| | || ||| |||||| || |||||||| ||||| || || Sbjct 1078442 TGATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCA 1078383 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 |||||| | || | ||| || ||||||||||||||| || ||| | | || || || Sbjct 1078382 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCAGACTACAA 1078323 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTT 111398 || ||||||||||| || || ||| | || || Sbjct 1078322 CATCCAAAAAGAATCCACTCTCCATCTGGTATT 1078290 Score = 98.7 bits (108), Expect = 8e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || || ||||| || |||| || |||||||| || ||||| ||||| ||| Sbjct 1078729 ATGCAGATCTTCGTCAAGACACTGACTGGTAAAACCATCACTCTGGAAGTTGAACC-AGC 1078671 Query 111247 -GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| | ||| | || ||| |||||| || |||||||| ||||| || || Sbjct 1078670 TGATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCA 1078611 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 |||||| | || | ||| || ||||||||||||||| || ||| | | || || || Sbjct 1078610 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACGCTTTCAGACTACAA 1078551 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTT 111398 || ||||||||||| || || ||| | || || Sbjct 1078550 CATCCAAAAAGAATCAACTCTCCATCTTGTATT 1078518 Score = 98.7 bits (108), Expect = 8e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || || ||||| || |||| || |||||||| ||| | ||| ||||| ||| Sbjct 1078957 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACC-AGC 1078899 Query 111247 -GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| | ||| | || ||| |||||| || |||||||| ||||| ||||| Sbjct 1078898 TGATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGATCA 1078839 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 |||| | | || | ||| || ||||||||||||||| || ||| | | || || || Sbjct 1078838 ACAACGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCAGACTACAA 1078779 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTT 111398 || ||||||||||| || || ||| | || || Sbjct 1078778 CATCCAAAAAGAATCCACTCTCCATCTGGTATT 1078746 Score = 98.7 bits (108), Expect = 8e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| ||||| ||||| || |||| || |||||||| ||| | || ||||| ||| Sbjct 1149863 ATGCAGATTTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACC-AGC 1149805 Query 111247 -GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| | ||| | || ||| |||||| || |||||||| ||||| || || Sbjct 1149804 TGATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCA 1149745 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 |||||| | || | ||| || ||||||||||||||| || ||| | | || || || Sbjct 1149744 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTACAA 1149685 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTT 111398 || ||||||||||| || || ||| | || || Sbjct 1149684 CATCCAAAAAGAATCCACTCTCCATCTTGTATT 1149652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423016958729800