Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq2445 111 1e-19 seq3036 91.5 1e-13 >seq2445 Length=2603117 Score = 111 bits (122), Expect = 1e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | || || || || || |||||||| ||| | ||| ||| | || Sbjct 1078501 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCT 1078442 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| |||||||| ||| | || | ||||| Sbjct 1078441 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCAA 1078382 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATT-TAAAA-ACTATGGCCGATTACA 22011 || ||| | ||||||||||| |||||| | |||||| || || ||||| | || |||| Sbjct 1078381 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTAT--CAGACTACA 1078324 Query 22012 ATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 | || || || ||||| ||||| ||| |||||||| | ||||||||||| Sbjct 1078323 ACATCCAAAAAGAATCCACTCTCCATCTGGTATTAAGATTACGAGGAGG 1078275 Score = 105 bits (116), Expect = 5e-18 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | || || || || || |||||||| ||| | ||| ||| | || Sbjct 1078273 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCT 1078214 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| |||||||| ||| | || | ||||| Sbjct 1078213 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCAA 1078154 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATT-TAAAA-ACTATGGCCGATTACA 22011 || ||| | ||||||||||| |||||| | |||||| || || ||||| | || |||| Sbjct 1078153 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTAT--CAGACTACA 1078096 Query 22012 ATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 | || || || ||||| ||||| ||| | |||||| | ||||||||||| Sbjct 1078095 ACATCCAAAAAGAATCCACTCTCCATCTTGTATTAAGATTACGAGGAGG 1078047 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 || |||||| || || | || ||||| || || |||||||| ||| | || ||| | Sbjct 1079189 CAGAATGCAGATCTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACC 1079130 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 || || || | | || |||| |||||| || ||||| ||| | || | | Sbjct 1079129 AGCTGATACCATTGAAAATGTTAAAACTAAAATTCAAGACAAAGAAGGTATTCCCCCAGA 1079070 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 |||||| ||| | ||||||||||| |||||| | |||||| | ||| | | || || Sbjct 1079069 CCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTA 1079010 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||| || || || ||||| ||||| ||| | |||||| | ||||||||||| Sbjct 1079009 CAACATCCAAAAAGAATCCACTCTCCATCTTGTATTAAGATTACGAGGAGG 1078959 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | || ||| | || || |||||||| || ||||| ||| | || Sbjct 1078729 ATGCAGATCTTCGTCAAGACACTGACTGGTAAAACCATCACTCTGGAAGTTGAACCAGCT 1078670 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| |||||||| ||| | || | ||||| Sbjct 1078669 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCAA 1078610 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || ||| | ||||||||||| |||||| | |||||| | ||| | | || ||||| Sbjct 1078609 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACGCTTTCAGACTACAAC 1078550 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || || ||||| ||||| ||| | |||||| | ||||||||||| Sbjct 1078549 ATCCAAAAAGAATCAACTCTCCATCTTGTATTAAGATTACGAGGAGG 1078503 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | || || || || || |||||||| ||| | ||| ||| | ||| Sbjct 1149635 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCA 1149576 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| |||||||| ||| | || | ||||| Sbjct 1149575 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCAA 1149516 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || ||| | ||||||||||| |||||| | |||||| | ||| | | || |||||| Sbjct 1149515 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTACAAT 1149456 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || || ||||| ||||| ||| | ||||| | ||| ||||||| Sbjct 1149455 ATCCAAAAAGAATCCACTCTCCATCTTGTATTGAGATTAAGAGGAGG 1149409 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | || ||||| || || |||||||| ||| | || ||| | || Sbjct 1149863 ATGCAGATTTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACCAGCT 1149804 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| |||||||| ||| | || | ||||| Sbjct 1149803 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCAA 1149744 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || ||| | ||||||||||| |||||| | |||||| | ||| | | || ||||| Sbjct 1149743 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTACAAC 1149684 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || || ||||| ||||| ||| | |||||| | ||||||||||| Sbjct 1149683 ATCCAAAAAGAATCCACTCTCCATCTTGTATTAAGATTACGAGGAGG 1149637 Score = 102 bits (112), Expect = 6e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | || || || || || |||||||| ||| | ||| ||| | || Sbjct 1078957 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCT 1078898 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| |||||||| ||| | || | | ||| Sbjct 1078897 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGATCAA 1078838 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATT-TAAAA-ACTATGGCCGATTACA 22011 || || | ||||||||||| |||||| | |||||| || || ||||| | || |||| Sbjct 1078837 CAACGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTAT--CAGACTACA 1078780 Query 22012 ATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 | || || || ||||| ||||| ||| |||||||| | ||||||||||| Sbjct 1078779 ACATCCAAAAAGAATCCACTCTCCATCTGGTATTAAGATTACGAGGAGG 1078731 Score = 102 bits (112), Expect = 6e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 || |||||| || || | || ||||| || || |||||||| ||| | || ||| | Sbjct 1150095 CAGAATGCAGATCTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACC 1150036 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 || || || | | || |||| |||||| || ||||| ||| | || | | Sbjct 1150035 AGCTGATACCATTGAAAATGTTAAAACTAAAATTCAAGACAAAGAAGGTATTCCCCCAGA 1149976 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 |||||| ||| | ||||||||||| |||||| | |||||| | ||| | | || || Sbjct 1149975 CCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTA 1149916 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||| || || || ||||| ||||| ||| | ||||| | ||||||||||| Sbjct 1149915 CAACATCCAAAAAGAATCAACTCTCCATCTTGTATTGAGATTACGAGGAGG 1149865 >seq3036 Length=1877736 Score = 91.5 bits (100), Expect = 1e-13 Identities = 165/240 (69%), Gaps = 1/240 (0%) Strand=Plus/Minus Query 21821 GTAATAGTGCAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGA 21880 |||| | || |||||||| || ||| |||| || | || || || ||||| ||| | || Sbjct 1772396 GTAAAATTG-AAAATGCAGATCTTTGTTAAGACTCTCACTGGAAAGACCATCACCCTCGA 1772338 Query 21881 AACGGAAGCCGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT 21940 | ||| | || || || | | || | || || || ||||| || ||| | Sbjct 1772337 AGTAGAACCAGCTGATACCATTGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGTAT 1772278 Query 21941 ACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTAT 22000 || | | || || | |||||||||||||| ||||||||||||||| | ||| | Sbjct 1772277 TCCCCCAGATCAGCAACGTCTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCT 1772218 Query 22001 GGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 | |||||||| |||||||| ||||| || || ||| | ||| | || || ||||||| Sbjct 1772217 CTCTGATTACAACATTCAGAAAGAATCAACACTCCATCTTGTACTTCGATTGAGAGGAGG 1772158 Score = 91.5 bits (100), Expect = 1e-13 Identities = 165/240 (69%), Gaps = 1/240 (0%) Strand=Plus/Minus Query 21821 GTAATAGTGCAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGA 21880 |||| | || |||||||| || ||| |||| || | || || || ||||| ||| | || Sbjct 1839514 GTAAAATTG-AAAATGCAGATCTTTGTTAAGACTCTCACTGGAAAGACCATCACCCTCGA 1839456 Query 21881 AACGGAAGCCGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT 21940 | ||| | || || || | | || | || || || ||||| || ||| | Sbjct 1839455 AGTAGAACCAGCTGATACCATTGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGTAT 1839396 Query 21941 ACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTAT 22000 || | | || || | |||||||||||||| ||||||||||||||| | ||| | Sbjct 1839395 TCCCCCAGATCAGCAACGTCTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCT 1839336 Query 22001 GGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 | |||||||| |||||||| ||||| || || ||| | ||| | || || ||||||| Sbjct 1839335 CTCTGATTACAACATTCAGAAAGAATCAACACTCCATCTTGTACTTCGATTGAGAGGAGG 1839276 Score = 87.8 bits (96), Expect = 1e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 21960 CTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAG 22019 |||||||||||||| ||||||||||||||| | ||| | | |||||||| |||||| Sbjct 1771118 CTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCTCTCTGATTACAACATTCAG 1771059 Query 22020 AAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||| ||||| ||| | ||| | || || ||||||| Sbjct 1771058 AAAGAATCAACTCTCCATCTTGTACTTCGATTGAGAGGAGG 1771018 Score = 87.8 bits (96), Expect = 1e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 21960 CTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAG 22019 |||||||||||||| ||||||||||||||| | ||| | | |||||||| |||||| Sbjct 1838692 CTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCTCTCTGATTACAACATTCAG 1838633 Query 22020 AAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||| ||||| ||| | ||| | || || ||||||| Sbjct 1838632 AAAGAATCAACTCTCCATCTTGTACTTCGATTGAGAGGAGG 1838592 Score = 86.0 bits (94), Expect = 4e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 21960 CTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAG 22019 |||||||||||||| ||||||||||||||| | ||| | | |||||||| |||||| Sbjct 1771574 CTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCTCTCTGATTACAACATTCAG 1771515 Query 22020 AAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 || ||||| || || ||| | ||| | || || |||||||| Sbjct 1771514 AAAGAATCAACACTCCATCTTGTACTTCGATTGAGAGGAGGA 1771473 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 21960 CTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAG 22019 |||||||||||||| ||||||||||||||| | ||| | | |||||||| |||||| Sbjct 1771346 CTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCTCTCTGATTACAACATTCAG 1771287 Query 22020 AAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||| || || ||| | ||| | || || ||||||| Sbjct 1771286 AAAGAATCAACACTCCATCTTGTACTTCGATTGAGAGGAGG 1771246 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 ||||| || ||| | || | | || || | |||||||||||||| |||||||||||| Sbjct 1838953 GATAAGGAAGGTATTCCCCCAGATCAGCAACGTCTTATCTTTGCTGGTAAACAACTAGAA 1838894 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||| | ||| | | |||||||| |||||||| ||||| || || ||| | ||| | Sbjct 1838893 GATGGCAGAACCCTCTCTGATTACAACATTCAGAAAGAATCAACACTCCATCTTGTACTT 1838834 Query 22047 CGTTTACGAGGAGG 22060 || || ||||||| Sbjct 1838833 CGATTGAGAGGAGG 1838820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358105294397026