Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2445 100 3e-16 seq3036 84.2 2e-11 >seq2445 Length=2603117 Score = 100 bits (110), Expect = 3e-16 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| || | ||| || | ||| | |||| || ||||| ||||||||||| | Sbjct 1149865 CCTCCTCGTAATCTCAATACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAGTC--TG 1149922 Query 138448 ATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | ||| | | || || | ||||||||| | | |||| | | |||||||| || | Sbjct 1149923 AAAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGG 1149982 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCC 138564 | |||||||||||||| ||| |||| ||||||| | ||| | ||| || | | || Sbjct 1149983 GAATACCTTCTTTGTC-TTGAATTTTAGTTTTAACATTTTCAATGGTATCAGCTGGTTCT 1150041 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | ||||||||||||| || || || || |||||||| Sbjct 1150042 ACCTCTAAGGTGATGGTTTTACCAGTCAATGTCTTGACGAAGATCTGCAT 1150091 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| || | || || | ||| | | || || ||||| ||||||||||| | Sbjct 1078959 CCTCCTCGTAATCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTC--TG 1079016 Query 138448 ATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | ||| | | || || | ||||||||| | | |||| | | |||||||| || | Sbjct 1079017 AAAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGG 1079076 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCC 138564 | |||||||||||||| ||| |||| ||||||| | ||| | ||| || | | || Sbjct 1079077 GAATACCTTCTTTGTC-TTGAATTTTAGTTTTAACATTTTCAATGGTATCAGCTGGTTCT 1079135 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | ||||||||||||| || || || || |||||||| Sbjct 1079136 ACCTCTAAGGTGATGGTTTTACCAGTCAATGTCTTGACGAAGATCTGCAT 1079185 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| ||||| || | || || | ||| | | || || ||||| ||||||||||| | Sbjct 1078046 GCCTCCTCGTAATCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTC--T 1078103 Query 138447 CATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGA 138504 ||||| | | || || | ||||||||| | | |||| | | |||||||| || Sbjct 1078104 GATAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGG 1078163 Query 138505 GGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTC 138563 || ||||||||||| || ||| |||| | ||| | | ||| | ||| || | | || Sbjct 1078164 GGAATACCTTCTTTATC-TTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTC 1078222 Query 138564 CACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || | || | ||||||||||||| ||| || || || |||||||| Sbjct 1078223 AACTTCAAGGGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078273 Score = 82.4 bits (90), Expect = 8e-11 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| || | || || | ||| | | || || ||||| ||||||||||| | Sbjct 1078275 CCTCCTCGTAATCTTAATACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTC--TG 1078332 Query 138448 ATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 ||||| | | || || | ||||||||| | | |||| | | |||||||| || | Sbjct 1078333 ATAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGG 1078392 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564 | ||||||||||| || ||| |||| | ||| | | ||| | ||| || | | || Sbjct 1078393 GAATACCTTCTTTATC-TTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCA 1078451 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || | || | ||||||||||||| ||| || || || |||||||| Sbjct 1078452 ACTTCAAGGGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078501 Score = 82.4 bits (90), Expect = 8e-11 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| || | || || | ||| | | || || ||||| ||||||||||| | Sbjct 1078731 CCTCCTCGTAATCTTAATACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTC--TG 1078788 Query 138448 ATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 ||||| | | || || | ||||||||| | | |||| | || ||||| || || | Sbjct 1078789 ATAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCTGGGG 1078848 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564 | ||||||||||| || ||| |||| | ||| | | ||| | ||| || | | || Sbjct 1078849 GAATACCTTCTTTATC-TTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCA 1078907 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || | || | ||||||||||||| ||| || || || |||||||| Sbjct 1078908 ACTTCAAGGGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078957 Score = 82.4 bits (90), Expect = 8e-11 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| || | || || | ||| | | || || ||||| ||||||||||| | Sbjct 1149637 CCTCCTCGTAATCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTC--TG 1149694 Query 138448 ATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | ||| | | || || | ||||||||| | | |||| | | |||||||| || | Sbjct 1149695 AAAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGG 1149754 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564 | ||||||||||| || ||| |||| | ||| | | ||| | ||| || | | || Sbjct 1149755 GAATACCTTCTTTATC-TTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCT 1149813 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | ||||||||||||| || || || ||||||||||| Sbjct 1149814 ACCTCTAAGGTGATGGTTTTACCAGTCAATGTCTTGACGAAAATCTGCAT 1149863 >seq3036 Length=1877736 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| || | || | ||| | |||| || || ||||||||||| || Sbjct 1772158 CCTCCTCTCAATCGAAGTACAAGATGGAGTGTTGATTCTTTCTGAATGTTGTAATCAGAG 1772217 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || | || | || || ||||||||||| | | |||| ||||| || || || || || Sbjct 1772218 AGGGTTCTGCCA-TCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGGGG 1772276 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| || || ||| || ||||| | ||| | ||| || | | || || Sbjct 1772277 AATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGTTCTAC 1772336 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || ||||| ||||| || ||||| |||||||| Sbjct 1772337 TTCGAGGGTGATGGTCTTTCCAGTGAGAGTCTTAACAAAGATCTGCAT 1772384 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| || | || | ||| | |||| || || ||||||||||| || Sbjct 1839276 CCTCCTCTCAATCGAAGTACAAGATGGAGTGTTGATTCTTTCTGAATGTTGTAATCAGAG 1839335 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || | || | || || ||||||||||| | | |||| ||||| || || || || || Sbjct 1839336 AGGGTTCTGCCA-TCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGGGG 1839394 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| || || ||| || ||||| | ||| | ||| || | | || || Sbjct 1839395 AATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGTTCTAC 1839454 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || ||||| ||||| || ||||| |||||||| Sbjct 1839455 TTCGAGGGTGATGGTCTTTCCAGTGAGAGTCTTAACAAAGATCTGCAT 1839502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496234677541680