Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1919 89.7 5e-13 >seq1919 Length=159031 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || || || ||||||| ||| |||||||| | || || ||||| || || |||||||| Sbjct 44208 GCACCTCCACGTAATCTCAATACCAAATGGAGGGTCGATTCTTTCTGGATGTTGTAATCC 44267 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || | ||| || || || |||||||| | ||||||||||| ||||| || Sbjct 44268 GAGAGAGTTCTGCCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCGCTGTTGATCTGGT 44327 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTC 127062 || ||||| || || | | ||| | | || |||| | ||| | ||| || | || Sbjct 44328 GGAATGCCTTCTTTAT-CTTGAATCTTGGCTTTGACATTTTCTATGGTATCAGCTGGTTC 44386 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| || | ||| | || || || |||| ||||| || || |||||||| Sbjct 44387 GACCTCTAAGGTGATGGTCTTACCAGTCAATGTTTTGACGAAGATCTGCAT 44437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475474237336560