Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2445 131 2e-25 seq1919 105 6e-18 >seq2445 Length=2603117 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || | || || || ||||| || |||||||| |||||||| || || || Sbjct 1078500 ATACCTCCTCGTAATCTTAATACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCT 1078559 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || ||| ||||||||||| || || | ||||||| ||| ||||| || Sbjct 1078560 GAAAGCGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGG 1078619 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| |||||||||||||||||||| ||||| ||| | ||| || | | || Sbjct 1078620 GGAATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCA 1078679 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| | ||||| || || || || || || || || ||||| Sbjct 1078680 ACTTCCAGAGTGATGGTTTTACCAGTCAGTGTCTTGACGAAGATCTGCAT 1078729 Score = 127 bits (140), Expect = 2e-24 Identities = 171/237 (72%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 45106 ATTTTATT--CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATT 45163 |||||| | ||||| | | ||||| || ||||| || || ||||| ||||||||||| Sbjct 1149399 ATTTTACTGGCCTCCTCTTAATCTCAATACAAGATGGAGAGTGGATTCTTTTTGGATATT 1149458 Query 45164 ATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTG 45223 || || | ||| || ||| ||||||||||| || || | ||||||| ||| || Sbjct 1149459 GTAGTCTGAAAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTG 1149518 Query 45224 GTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGA 45283 ||| || ||||| |||||||||||||||||||| ||||| ||| | ||| || | Sbjct 1149519 GTCTGGGGGAATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCTGC 1149578 Query 45284 AGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || ||||| || || | ||||| || || | ||| || || || || ||||| Sbjct 1149579 TGGTTCAACTTCAAGGGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1149635 Score = 123 bits (136), Expect = 2e-23 Identities = 170/237 (72%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 45106 ATTTTATT--CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATT 45163 |||||| | ||||| || | || || || ||||| || || ||||| |||||||| || Sbjct 1078037 ATTTTACTGGCCTCCTCGTAATCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTT 1078096 Query 45164 ATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTG 45223 || || | ||| || ||| ||||||||||| || || | ||||||| ||| || Sbjct 1078097 GTAGTCTGATAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTG 1078156 Query 45224 GTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGA 45283 ||| || ||||| |||||||||||||||||||| ||||| ||| | ||| || | Sbjct 1078157 GTCTGGGGGAATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGC 1078216 Query 45284 AGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || ||||| || || | ||||| || || | ||| || || || || ||||| Sbjct 1078217 TGGTTCAACTTCAAGGGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078273 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || | || || || ||||| || || ||||| |||||||| || || || Sbjct 1078272 ATACCTCCTCGTAATCTTAATACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCT 1078331 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || ||| ||||||||||| || || | ||||||| ||| ||||| || Sbjct 1078332 GATAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGG 1078391 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| |||||||||||||||||||| ||||| ||| | ||| || | | || Sbjct 1078392 GGAATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCA 1078451 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || | ||||| || || | ||| || || || || ||||| Sbjct 1078452 ACTTCAAGGGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078501 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || | || || || ||||| || || ||||| |||||||| || || || Sbjct 1078728 ATACCTCCTCGTAATCTTAATACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCT 1078787 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || ||| ||||||||||| || || | ||||||||||| || || || Sbjct 1078788 GATAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCTGGG 1078847 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| |||||||||||||||||||| ||||| ||| | ||| || | | || Sbjct 1078848 GGAATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCA 1078907 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || | ||||| || || | ||| || || || || ||||| Sbjct 1078908 ACTTCAAGGGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078957 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || | || || || ||||| || || ||||| |||||||| || || || Sbjct 1149634 ATACCTCCTCGTAATCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCT 1149693 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || ||| ||||||||||| || || | ||||||| ||| ||||| || Sbjct 1149694 GAAAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGG 1149753 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| |||||||||||||||||||| ||||| ||| | ||| || | | || Sbjct 1149754 GGAATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCT 1149813 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | || | ||||| || || | || || || ||||| ||||| Sbjct 1149814 ACCTCTAAGGTGATGGTTTTACCAGTCAATGTCTTGACGAAAATCTGCAT 1149863 Score = 111 bits (122), Expect = 1e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || | ||||| || ||||| || |||||||| |||||||| || || || Sbjct 1149862 ATACCTCCTCGTAATCTCAATACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCT 1149921 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || ||| ||||||||||| || || | ||||||| ||| ||||| || Sbjct 1149922 GAAAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGG 1149981 Query 45231 GGAATGCCTTCTTTATCTTGAATTTT 45256 ||||| |||||||| ||||||||||| Sbjct 1149982 GGAATACCTTCTTTGTCTTGAATTTT 1150007 Score = 102 bits (112), Expect = 7e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || | || || || ||||| || || ||||| |||||||| || || || Sbjct 1078956 ATACCTCCTCGTAATCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCT 1079015 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || ||| ||||||||||| || || | ||||||| ||| ||||| || Sbjct 1079016 GAAAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGG 1079075 Query 45231 GGAATGCCTTCTTTATCTTGAATTTT 45256 ||||| |||||||| ||||||||||| Sbjct 1079076 GGAATACCTTCTTTGTCTTGAATTTT 1079101 >seq1919 Length=159031 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| || | ||||| || | ||| || || ||||| || ||||| || ||||| | Sbjct 44211 CCTCCACGTAATCTCAATACCAAATGGAGGGTCGATTCTTTCTGGATGTTGTAATCCGAG 44270 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | ||| || | ||| ||||| || | |||||||| || || || || ||| Sbjct 44271 AGAGTTCTGCCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCGCTGTTGATCTGGTGGA 44330 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 |||||||||||||||||||| || ||||| ||||| ||| || | | ||||| Sbjct 44331 ATGCCTTCTTTATCTTGAATCTTGGCTTTGACATTTTCTATGGTATCAGCTGGTTCGACC 44390 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || | || | || || || || | ||||| || || || |||||| Sbjct 44391 TCTAAGGTGATGGTCTTACCAGTCAATGTTTTGACGAAGATCTGCATC 44438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451977949971240