Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq2445 84.2 2e-11 >seq2445 Length=2603117 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/232 (68%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| |||| || | || ||| | ||| | |||| ||||||||| ||||| || || | Sbjct 1149408 GCCTCCTCTTAATCTCAATACAAGATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTG- 1149466 Query 39552 CAAAACGCGTTC----ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCG 39607 || | |||| ||| ||||||||||| || |||| || || | || || || | Sbjct 1149467 ---AAAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTG 1149523 Query 39608 AGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTT 39667 ||| | |||||||| || ||||| ||| | | | | || ||||| || Sbjct 1149524 GGGGAATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCTGCTGGTT 1149583 Query 39668 CCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || || | || || |||||||| || ||||| || |||||||||||||| Sbjct 1149584 CAACTTCAAGGGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1149635 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/231 (68%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||| || | | ||||| ||| | |||| ||||||||| || || || || | Sbjct 1078731 CCTCCTCGTAATCTTAATACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGAT 1078790 Query 39553 AAAACGCGTTC----ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGA 39608 | | |||| ||| ||||||||||| || |||| || || || || ||||| | Sbjct 1078791 A----GTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCTGG 1078846 Query 39609 GGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTC 39668 ||| | |||||||| || ||||| ||| | | | | || || || ||| Sbjct 1078847 GGGAATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTC 1078906 Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || | || || |||||||| || ||||| || |||||||||||||| Sbjct 1078907 AACTTCAAGGGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078957 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/231 (68%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||| || | | ||| | ||| | |||| ||||||||| || || || || | Sbjct 1078959 CCTCCTCGTAATCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTG-- 1079016 Query 39553 AAAACGCGTTC----ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGA 39608 || | |||| ||| ||||||||||| || |||| || || | || || || | Sbjct 1079017 --AAAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGG 1079074 Query 39609 GGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTC 39668 ||| | ||||||||||| ||||| ||||| | | | || || || ||| Sbjct 1079075 GGGAATACCTTCTTTGTCTTGAATTTTAGTTTTAACATTTTCAATGGTATCAGCTGGTTC 1079134 Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || || || || |||||||| || || || || |||||||||||||| Sbjct 1079135 TACCTCTAAGGTGATGGTTTTACCAGTCAATGTCTTGACGAAGATCTGCAT 1079185 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/231 (68%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||| || | || ||| | ||| | ||| ||||||||| || || || || | Sbjct 1149865 CCTCCTCGTAATCTCAATACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCTG-- 1149922 Query 39553 AAAACGCGTTC----ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGA 39608 || | |||| ||| ||||||||||| || |||| || || | || || || | Sbjct 1149923 --AAAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGG 1149980 Query 39609 GGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTC 39668 ||| | ||||||||||| ||||| ||||| | | | || || || ||| Sbjct 1149981 GGGAATACCTTCTTTGTCTTGAATTTTAGTTTTAACATTTTCAATGGTATCAGCTGGTTC 1150040 Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || || || || |||||||| || || || || |||||||||||||| Sbjct 1150041 TACCTCTAAGGTGATGGTTTTACCAGTCAATGTCTTGACGAAGATCTGCAT 1150091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347350680189077