Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3036 98.7 1e-15 seq2445 86.0 6e-12 seq1919 86.0 6e-12 >seq3036 Length=1877736 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| || || ||||||||| |||| || || | | Sbjct 1771928 ATGCAGATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTCGAAGTAGAACCAGCT 1771869 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | ||| | |||| || |||| || || || ||||||||| | || || Sbjct 1771868 GATACCATTGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGAATTCCCCCAGATCAG 1771809 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || || | || || ||||| || || || | | |||||| || |||||| Sbjct 1771808 CAACGTCTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCTCTCTGATTACAAC 1771749 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || ||| |||| || ||| | || || || |||||||| || Sbjct 1771748 ATCCAGAAAGAATCGACACTCCATCTTGTACTTCGATTGAGAGGAGG 1771702 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| || || ||||||||| |||| || || | | Sbjct 1772156 ATGCAGATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTCGAAGTAGAACCAGCT 1772097 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | ||| | |||| || |||| || || || ||||||||| | || || Sbjct 1772096 GATACCATTGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGAATTCCCCCAGATCAG 1772037 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || || | || || ||||| || || || | | |||||| || |||||| Sbjct 1772036 CAACGTCTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCTCTCTGATTACAAC 1771977 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || ||| |||| || ||| | || || || |||||||| || Sbjct 1771976 ATCCAGAAAGAATCGACACTCCATCTTGTACTTCGATTGAGAGGAGG 1771930 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| || || ||||||||| |||| || || | | Sbjct 1839274 ATGCAGATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTCGAAGTAGAACCAGCT 1839215 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | ||| | |||| || |||| || || || ||||||||| | || || Sbjct 1839214 GATACCATTGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGAATTCCCCCAGATCAG 1839155 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || || | || || ||||| || || || | | |||||| || |||||| Sbjct 1839154 CAACGTCTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCTCTCTGATTACAAC 1839095 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || ||| |||| || ||| | || || || |||||||| || Sbjct 1839094 ATCCAGAAAGAATCGACACTCCATCTTGTACTTCGATTGAGAGGAGG 1839048 >seq2445 Length=2603117 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || | || || |||||||||||| | || || || | | Sbjct 1150092 AATGCAGATCTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACCAGC 1150033 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | ||| ||||| ||||| | |||||||| || |||||| | ||||| Sbjct 1150032 TGATACCATTGAAAATGTTAAAACTAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCA 1149973 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTAC 38420 ||| | | || | || || ||||| |||| || | || ||| ||| |||||| Sbjct 1149972 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCA--GACTAC 1149915 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| ||| | || || ||| | || || | || |||| || Sbjct 1149914 AACATCCAAAAAGAATCAACTCTCCATCTTGTATTGAGATTACGAGGAGG 1149865 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/207 (70%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || | || || |||||||||||| | || || || | | Sbjct 1079186 AATGCAGATCTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACCAGC 1079127 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | ||| ||||| ||||| | |||||||| || |||||| | ||||| Sbjct 1079126 TGATACCATTGAAAATGTTAAAACTAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCA 1079067 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTAC 38420 ||| | | || | || || ||||| |||| || | || ||| ||| |||||| Sbjct 1079066 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCA--GACTAC 1079009 Query 38421 AACATCCAAAAGGAAGCGACGCTGCAT 38447 ||||||||||| ||| | || || ||| Sbjct 1079008 AACATCCAAAAAGAATCCACTCTCCAT 1078982 Score = 82.4 bits (90), Expect = 8e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || |||||||||||| | || || || | | Sbjct 1078501 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCT 1078442 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | ||| | |||| ||||| | || ||||| || |||||| | |||||| Sbjct 1078441 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCAA 1078382 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTACA 38421 || | | || | || || ||||| |||| || | || ||| ||| ||||||| Sbjct 1078381 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCA--GACTACA 1078324 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 |||||||||| ||| | || || ||| |||| Sbjct 1078323 ACATCCAAAAAGAATCCACTCTCCATCTGGT 1078293 Score = 82.4 bits (90), Expect = 8e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || |||||||||||| | || || || | | Sbjct 1078957 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCT 1078898 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | ||| | |||| ||||| | || ||||| || |||||| | || ||| Sbjct 1078897 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGATCAA 1078838 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTACA 38421 || || | || | || || ||||| |||| || | || ||| ||| ||||||| Sbjct 1078837 CAACGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCA--GACTACA 1078780 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 |||||||||| ||| | || || ||| |||| Sbjct 1078779 ACATCCAAAAAGAATCCACTCTCCATCTGGT 1078749 Score = 82.4 bits (90), Expect = 8e-11 Identities = 158/231 (68%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || |||||||||||| | || || || | | Sbjct 1149635 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCA 1149576 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | ||| | |||| ||||| | || ||||| || |||||| | |||||| Sbjct 1149575 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCAA 1149516 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTACA 38421 || | | || | || || ||||| |||| || | || ||| ||| ||||||| Sbjct 1149515 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCA--GACTACA 1149458 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 | |||||||| ||| | || || ||| | || || | || ||||| |||| Sbjct 1149457 ATATCCAAAAAGAATCCACTCTCCATCTTGTATTGAGATTAAGAGGAGGCC 1149407 >seq1919 Length=159031 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| ||||| | || || || ||||||||| | || ||||| | Sbjct 44440 AAGATGCAGATCTTCGTCAAAACATTGACTGGTAAGACCATCACCTTAGAGGTCGAACCA 44381 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | || | | | ||| | |||| || || | || ||||| || ||||| | || Sbjct 44380 GCTGATACCATAGAAAATGTCAAAGCCAAGATTCAAGATAAAGAAGGCATTCCACCAGAT 44321 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 |||||||| | |||| || || || || || || || | | || ||| || ||| Sbjct 44320 CAACAGCGATTGATTTTTGCTGGAAAGCAACTTGAAGATGGCAGAACTCTCTCGGATTAC 44261 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 |||||||| || ||| |||| || |||||||| Sbjct 44260 AACATCCAGAAAGAATCGACCCTCCATTTGGT 44229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500144859096960