Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq2445 185 2e-41 seq3036 143 6e-29 seq1919 141 2e-28 seq2241 93.3 9e-14 >seq2445 Length=2603117 Score = 185 bits (204), Expect = 2e-41 Identities = 174/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| ||||| || |||||||| |||||||| |||||||| || | ||| || Sbjct 1149414 TCTTAATCTCAATACAAGATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAAAGTGT 1149473 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | || ||||| || ||||| | || |||||||||||| ||||| || Sbjct 1149474 TCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACC 1149533 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| ||||||||||| ||||| || |||||||| || | ||| |||||||| Sbjct 1149534 TTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCTGCTGGTTCAACTTCAAG 1149593 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | || || || |||||||| || ||||| | ||||| Sbjct 1149594 GGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1149635 Score = 168 bits (186), Expect = 1e-36 Identities = 167/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| || ||||| || |||||||| |||||||| || ||||| || | || ||||| || Sbjct 1078058 TCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGATAGTGTTCTACC 1078117 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | || ||||| || ||||| | || |||||||||||| ||||| |||||||| Sbjct 1078118 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACCTTCTTT 1078177 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 ||||||||||| ||||| || |||||||| || | ||| ||||||||||| | Sbjct 1078178 ATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCAACTTCAAGGGTGAT 1078237 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || |||||||| || ||||| | ||||| Sbjct 1078238 GGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078273 Score = 165 bits (182), Expect = 2e-35 Identities = 166/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| || || || || |||||||| |||||||| || ||||| || | || ||||| || Sbjct 1078286 TCTTAATACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGATAGTGTTCTACC 1078345 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | || ||||| || ||||| | || |||||||||||| ||||| |||||||| Sbjct 1078346 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACCTTCTTT 1078405 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 ||||||||||| ||||| || |||||||| || | ||| ||||||||||| | Sbjct 1078406 ATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCAACTTCAAGGGTGAT 1078465 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || |||||||| || ||||| | ||||| Sbjct 1078466 GGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078501 Score = 165 bits (182), Expect = 2e-35 Identities = 166/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| || || || || |||||||| |||||||| || ||||| || | || ||||| || Sbjct 1078742 TCTTAATACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGATAGTGTTCTACC 1078801 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | || ||||| || ||||| | ||||||||| ||||| ||||| |||||||| Sbjct 1078802 ATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCTGGGGGAATACCTTCTTT 1078861 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 ||||||||||| ||||| || |||||||| || | ||| ||||||||||| | Sbjct 1078862 ATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCAACTTCAAGGGTGAT 1078921 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || |||||||| || ||||| | ||||| Sbjct 1078922 GGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078957 Score = 158 bits (174), Expect = 3e-33 Identities = 165/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| || ||||| || |||||||| |||||||| || ||||| || | ||| ||||| || Sbjct 1078970 TCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGAAAGTGTTCTACC 1079029 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | || ||||| || ||||| | || |||||||||||| ||||| |||||||| Sbjct 1079030 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACCTTCTTT 1079089 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 |||||||||||| || || || |||||||| || | ||| || || | ||| | Sbjct 1079090 GTCTTGAATTTTAGTTTTAACATTTTCAATGGTATCAGCTGGTTCTACCTCTAAGGTGAT 1079149 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || || ||||| || || ||||| | |||||| Sbjct 1079150 GGTTTTACCAGTCAATGTCTTGACGAAGATCTGCATT 1079186 Score = 158 bits (174), Expect = 3e-33 Identities = 165/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 |||||| ||||| || ||||| || |||||||| || ||||| || | ||| ||||| || Sbjct 1149876 TCTCAATACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCTGAAAGTGTTCTACC 1149935 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | || ||||| || ||||| | || |||||||||||| ||||| |||||||| Sbjct 1149936 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACCTTCTTT 1149995 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 |||||||||||| || || || |||||||| || | ||| || || | ||| | Sbjct 1149996 GTCTTGAATTTTAGTTTTAACATTTTCAATGGTATCAGCTGGTTCTACCTCTAAGGTGAT 1150055 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || || ||||| || || ||||| | |||||| Sbjct 1150056 GGTTTTACCAGTCAATGTCTTGACGAAGATCTGCATT 1150092 Score = 156 bits (172), Expect = 9e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| || ||||| || |||||||| |||||||| || ||||| || | ||| ||||| || Sbjct 1149648 TCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGAAAGTGTTCTACC 1149707 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | || ||||| || ||||| | || |||||||||||| ||||| |||||||| Sbjct 1149708 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACCTTCTTT 1149767 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 ||||||||||| ||||| || |||||||| || | ||| || || | ||| | Sbjct 1149768 ATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCTACCTCTAAGGTGAT 1149827 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| || || ||||| | ||||| Sbjct 1149828 GGTTTTACCAGTCAATGTCTTGACGAAAATCTGCAT 1149863 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| || ||||| || ||||| || |||||||| || ||||| || | ||| ||||| || Sbjct 1078514 TCTTAATACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCTGAAAGCGTTCTACC 1078573 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | || ||||| || ||||| | || |||||||||||| ||||| |||||||| Sbjct 1078574 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACCTTCTTT 1078633 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 ||||||||||| ||||| || |||||||| || | ||| ||||| || || | Sbjct 1078634 ATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCAACTTCCAGAGTGAT 1078693 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || |||| || || ||||| | ||||| Sbjct 1078694 GGTTTTACCAGTCAGTGTCTTGACGAAGATCTGCAT 1078729 >seq3036 Length=1877736 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || ||||| || ||||| ||||| |||||||| | || ||||| |||||||| Sbjct 1838610 ACAAGATGGAGAGTTGATTCTTTCTGAATGTTGTAATCAGAGAGGGTTCTGCCATCTTCT 1838669 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || || ||||| || |||||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 1838670 AGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCTTCCTTATCTTGG 1838729 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || || || || ||||||||||| | ||| ||||| ||||| | |||||| Sbjct 1838730 ATCTTAGCTTTTACATTTTCAATGGTGTCAGCTGGTTCTACTTCGAGGGTGATGGTCTTT 1838789 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 1838790 CCAGTGAGGGTCTTGACAAAGATCTGCAT 1838818 >seq1919 Length=159031 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 |||||| || | || || || || ||||| || || |||||||| | |||||||| || Sbjct 44222 TCTCAATACCAAATGGAGGGTCGATTCTTTCTGGATGTTGTAATCCGAGAGAGTTCTGCC 44281 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| || ||||| || || || || | ||| ||||| ||||| |||||||||||||| Sbjct 44282 ATCTTCAAGTTGCTTTCCAGCAAAAATCAATCGCTGTTGATCTGGTGGAATGCCTTCTTT 44341 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 |||||||| || ||||| || || ||||| || | ||| || || | ||| | Sbjct 44342 ATCTTGAATCTTGGCTTTGACATTTTCTATGGTATCAGCTGGTTCGACCTCTAAGGTGAT 44401 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || ||||| ||||| ||||| | ||||| Sbjct 44402 GGTCTTACCAGTCAATGTTTTGACGAAGATCTGCAT 44437 >seq2241 Length=6263672 Score = 93.3 bits (102), Expect = 9e-14 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 ||||||||||||||||||| | |||||||| |||||||| | || ||||| ||||| | Sbjct 1926956 CTTTTTGAATATTGTAATCTGAAAGAGTTCGGCCATCTTCTAATTGTTTACCAGCGAAAA 1926897 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | | ||||| || ||||||||||||||| Sbjct 1926896 TCAAACGTTGCTGATCTGGAGGAATGCCT 1926868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109418072123723