Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq2153 120 4e-22 >seq2153 Length=2898250 Score = 120 bits (132), Expect = 4e-22 Identities = 158/218 (72%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 37547 AAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAG 37606 |||| | ||||| | || |||||||| || || |||||||| || ||||||||||| || Sbjct 643469 AAAAGAATTCTTACCAAA-TTTTCATTCACAATACCATCACTGGCAGCAAAGAAAGCCAG 643527 Query 37607 AACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTT 37666 |||| | || || ||| ||| ||| | ||| || ||||| | | | |||||| Sbjct 643528 GACATGTGAAATGAAGTGTTGTTCTTCAGGTTTTAAAGCTTCCCAATGAATTAAATCTTT 643587 Query 37667 TGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCA 37726 || || |||||||| ||| | |||||||| ||| || ||| ||||| ||| Sbjct 643588 AGACAAGTCAACTTCTTCAGCAGTCCAAAATGATGCTTCAGCTTTTTTGTACATTTGCCA 643647 Query 37727 AATATCATTATGTTGTATTGGAAATATTACAAATCTAT 37764 ||||||| || ||| || || |||||||||||||||| Sbjct 643648 GATATCATCATATTGAATAGGGAATATTACAAATCTAT 643685 Score = 86.0 bits (94), Expect = 7e-12 Identities = 107/142 (75%), Gaps = 5/142 (4%) Strand=Plus/Plus Query 36827 TTAAAAATCTTCATCTAACGTAAATT--TTATTTCCTT-ATTACTATTCATAACTCCCAT 36883 ||||||||| |||| || ||||||| | ||| | || | || ||| |||||||| Sbjct 641696 TTAAAAATCAGCATCCAATGTAAATTGATGATTACTTTGACCACCTGACATCACTCCCAT 641755 Query 36884 TTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTTCTAGTGATATAT 36942 | |||||||||| || |||| |||| || ||||| || | || ||||| || ||||| Sbjct 641756 TCTTTGATATTCACCTACTC-TCTTCTCAAAAAAGTTAGATTTCCCTTCAAGGGATATTA 641814 Query 36943 TTTCCATAAAATCAAATGGATT 36964 ||||||||||||||| || || Sbjct 641815 ATTCCATAAAATCAAAAGGGTT 641836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592283711702760