Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq2445 134 1e-26 seq3036 86.0 5e-12 >seq2445 Length=2603117 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || || || || || ||||||||||| ||| ||| ||||| | Sbjct 1078501 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCT 1078442 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || |||| || |||| || || ||||| || | ||| ||| || Sbjct 1078441 GATACCATTGAAAATGTCAAAGCTAAAATTCAA-GATAAAGAAGGTATTCCCCCAGACCA 1078383 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| ||| | |||||||| || ||||||||||||||| || ||| | | || || || Sbjct 1078382 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCAGACTACAA 1078323 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||| ||||||||||| ||||| || |||||||||||||||||||||| || Sbjct 1078322 CATCCAAAAAGAATCCACTCTCCATCTGGTATTAAGATTACGAGGAGGTAT 1078272 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || || || || || ||||||||||| ||| ||| ||||| | Sbjct 1078957 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCT 1078898 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || |||| || |||| || || ||||| || | ||| |||||| Sbjct 1078897 GATACCATTGAAAATGTCAAAGCTAAAATTCAA-GATAAAGAAGGTATTCCCCCAGATCA 1078839 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| || | |||||||| || ||||||||||||||| || ||| | | || || || Sbjct 1078838 ACAACGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCAGACTACAA 1078779 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||| ||||||||||| ||||| || |||||||||||||||||||||| || Sbjct 1078778 CATCCAAAAAGAATCCACTCTCCATCTGGTATTAAGATTACGAGGAGGTAT 1078728 Score = 131 bits (144), Expect = 1e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || || ||||| || ||||||||||| ||| || ||||| | Sbjct 1149863 ATGCAGATTTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACCAGCT 1149804 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || |||| || |||| || || ||||| || | ||| ||| || Sbjct 1149803 GATACCATTGAAAATGTCAAAGCTAAAATTCAA-GATAAAGAAGGTATTCCCCCAGACCA 1149745 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| ||| | |||||||| || ||||||||||||||| || ||| | | || || || Sbjct 1149744 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTACAA 1149685 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||| ||||||||||| ||||| || | |||||||||||||||||||| || Sbjct 1149684 CATCCAAAAAGAATCCACTCTCCATCTTGTATTAAGATTACGAGGAGGTAT 1149634 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || || || || || ||||||||||| ||| ||| ||||| | Sbjct 1078273 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCT 1078214 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || |||| || |||| || || ||||| || | ||| ||| || Sbjct 1078213 GATACCATTGAAAATGTCAAAGCTAAAATTCAA-GATAAAGAAGGTATTCCCCCAGACCA 1078155 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| ||| | |||||||| || ||||||||||||||| || ||| | | || || || Sbjct 1078154 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCAGACTACAA 1078095 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||| ||||||||||| ||||| || | |||||||||||||||||||| Sbjct 1078094 CATCCAAAAAGAATCCACTCTCCATCTTGTATTAAGATTACGAGGAGG 1078047 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || || || || ||||| || ||||||||||| ||| || ||||| | Sbjct 1079186 AATGCAGATCTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACCAGC 1079127 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | || ||||| |||||||| || | ||| ||| || Sbjct 1079126 TGATACCATTGAAAATGTTAAAACTAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCA 1079067 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| ||| | |||||||| || ||||||||||||||| || ||| | | || || || Sbjct 1079066 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTACAA 1079007 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||| ||||||||||| ||||| || | |||||||||||||||||||| || Sbjct 1079006 CATCCAAAAAGAATCCACTCTCCATCTTGTATTAAGATTACGAGGAGGTAT 1078956 Score = 125 bits (138), Expect = 6e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || || ||| | || ||||||||||| || ||| ||||| | Sbjct 1078729 ATGCAGATCTTCGTCAAGACACTGACTGGTAAAACCATCACTCTGGAAGTTGAACCAGCT 1078670 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || |||| || |||| || || ||||| || | ||| ||| || Sbjct 1078669 GATACCATTGAAAATGTCAAAGCTAAAATTCAA-GATAAAGAAGGTATTCCCCCAGACCA 1078611 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| ||| | |||||||| || ||||||||||||||| || ||| | | || || || Sbjct 1078610 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACGCTTTCAGACTACAA 1078551 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||| ||||||||||| ||||| || | |||||||||||||||||||| || Sbjct 1078550 CATCCAAAAAGAATCAACTCTCCATCTTGTATTAAGATTACGAGGAGGTAT 1078500 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || || || || ||||| || ||||||||||| ||| || ||||| | Sbjct 1150092 AATGCAGATCTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACCAGC 1150033 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | || ||||| |||||||| || | ||| ||| || Sbjct 1150032 TGATACCATTGAAAATGTTAAAACTAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCA 1149973 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| ||| | |||||||| || ||||||||||||||| || ||| | | || || || Sbjct 1149972 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTACAA 1149913 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||| ||||||||||| ||||| || | ||||| |||||||||||||| || Sbjct 1149912 CATCCAAAAAGAATCAACTCTCCATCTTGTATTGAGATTACGAGGAGGTAT 1149862 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || || || || || ||||||||||| ||| ||| ||||| || Sbjct 1149635 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCA 1149576 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || |||| || |||| || || ||||| || | ||| ||| || Sbjct 1149575 GATACCATTGAAAATGTCAAAGCTAAAATTCAA-GATAAAGAAGGTATTCCCCCAGACCA 1149517 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| ||| | |||||||| || ||||||||||||||| || ||| | | || || || Sbjct 1149516 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTACAA 1149457 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 || ||||||||||| ||||| || | ||||| |||||| ||||||| Sbjct 1149456 TATCCAAAAAGAATCCACTCTCCATCTTGTATTGAGATTAAGAGGAGG 1149409 >seq3036 Length=1877736 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || | || || || ||||| ||| |||| ||||| | Sbjct 1771244 ATGCAGATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTCGAAGTAGAACCAGCT 1771185 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | || || ||| || || || ||| | ||| |||||| Sbjct 1771184 GATACCATTGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGAATTCCCCCAGATCAG 1771125 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | ||||||||||| || |||||| | |||||| | ||| | | ||||| ||| Sbjct 1771124 CAACGTCTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCTCTCTGATTACAAC 1771065 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||| |||||||| ||||| || | ||| | |||| ||||||| || Sbjct 1771064 ATTCAGAAAGAATCAACTCTCCATCTTGTACTTCGATTGAGAGGAGGTAT 1771015 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || | || || || ||||| ||| |||| ||||| | Sbjct 1838818 ATGCAGATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTCGAAGTAGAACCAGCT 1838759 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | || || ||| || || || ||| | ||| |||||| Sbjct 1838758 GACACCATTGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGAATTCCCCCAGATCAG 1838699 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | ||||||||||| || |||||| | |||||| | ||| | | ||||| ||| Sbjct 1838698 CAACGTCTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCTCTCTGATTACAAC 1838639 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||| |||||||| ||||| || | ||| | |||| ||||||| || Sbjct 1838638 ATTCAGAAAGAATCAACTCTCCATCTTGTACTTCGATTGAGAGGAGGTAT 1838589 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || ||||| || || | || || || ||||| ||| |||| ||||| | Sbjct 1771473 AATGCAGATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTCGAAGTAGAACCAGC 1771414 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | || || ||| || || || ||| | ||| |||||| Sbjct 1771413 TGATACCATTGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGAATTCCCCCAGATCA 1771354 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 || | ||||||||||| || |||||| | |||||| | ||| | | ||||| || Sbjct 1771353 GCAACGTCTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCTCTCTGATTACAA 1771294 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||||| |||||||| || || || | ||| | |||| ||||||| || Sbjct 1771293 CATTCAGAAAGAATCAACACTCCATCTTGTACTTCGATTGAGAGGAGGTAT 1771243 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || | || || || ||||| ||| |||| ||||| | Sbjct 1771700 ATGCAGATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTCGAAGTAGAACCAGCT 1771641 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | || || ||| || || || ||| | ||| |||||| Sbjct 1771640 GATACCATTGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGAATTCCCCCAGATCAG 1771581 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | ||||||||||| || |||||| | |||||| | ||| | | ||||| ||| Sbjct 1771580 CAACGTCTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCTCTCTGATTACAAC 1771521 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||| |||||||| || || || | ||| | |||| ||||||| || Sbjct 1771520 ATTCAGAAAGAATCAACACTCCATCTTGTACTTCGATTGAGAGGAGGAAT 1771471 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 |||||||| || ||||| || || | || || || ||||| ||| |||| ||||| Sbjct 1772387 AAAATGCAGATCTTTGTTAAGACTCTCACTGGAAAGACCATCACCCTCGAAGTAGAACCA 1772328 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 | || || | | || | || || ||| || || || || | ||| |||| Sbjct 1772327 GCTGATACCATTGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGTATTCCCCCAGAT 1772268 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || || | ||||||||||| || |||||| | |||||| | ||| | | ||||| Sbjct 1772267 CAGCAACGTCTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCTCTCTGATTAC 1772208 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||||||| |||||||| || || || | ||| | |||| ||||||| || Sbjct 1772207 AACATTCAGAAAGAATCAACACTCCATCTTGTACTTCGATTGAGAGGAGGTAT 1772155 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 |||||||| || ||||| || || | || || || ||||| ||| |||| ||||| Sbjct 1839505 AAAATGCAGATCTTTGTTAAGACTCTCACTGGAAAGACCATCACCCTCGAAGTAGAACCA 1839446 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 | || || | | || | || || ||| || || || || | ||| |||| Sbjct 1839445 GCTGATACCATTGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGTATTCCCCCAGAT 1839386 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || || | ||||||||||| || |||||| | |||||| | ||| | | ||||| Sbjct 1839385 CAGCAACGTCTTATCTTTGCTGGTAAACAACTAGAAGATGGCAGAACCCTCTCTGATTAC 1839326 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||||||| |||||||| || || || | ||| | |||| ||||||| || Sbjct 1839325 AACATTCAGAAAGAATCAACACTCCATCTTGTACTTCGATTGAGAGGAGGTAT 1839273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425381629928751