Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq3036 111 1e-19 >seq3036 Length=1877736 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAA-TGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 ||||||| ||||| | || || || || | || || | || ||||||||||| || || Sbjct 1771472 TTCCTCCTCTCAATCGAAGTACAAGATGGAGTGTTGAT-TCTTTCTGAATGTTGTAATCA 1771530 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || ||| | | |||| || ||||| || || || ||||| || |||||||| ||| | Sbjct 1771531 GAGAGGGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGG 1771590 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | || ||||| || | || || ||| || | | || | ||| | || Sbjct 1771591 GGAATTCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGTTCT 1771650 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||| ||||||||||| ||||||||||| |||||||||||||| Sbjct 1771651 ACTTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1771700 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAA-TGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 ||||| ||||| | || || || || | || || | || ||||||||||| || || || Sbjct 1771246 CCTCCTCTCAATCGAAGTACAAGATGGAGTGTTGAT-TCTTTCTGAATGTTGTAATCAGA 1771304 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 ||| | | |||| || ||||| || || || ||||| || |||||||| ||| | || Sbjct 1771305 GAGGGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGGGG 1771364 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | || ||||| || | || || ||| || | | || | ||| | || || Sbjct 1771365 AATTCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGTTCTAC 1771424 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| ||||||||||| ||||||||||| |||||||||||||| Sbjct 1771425 TTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1771472 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAA-TGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 ||||| ||||| | || || || || | || || | || ||||||||||| || || || Sbjct 1838820 CCTCCTCTCAATCGAAGTACAAGATGGAGTGTTGAT-TCTTTCTGAATGTTGTAATCAGA 1838878 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 ||| | | |||| || ||||| || || || ||||| || |||||||| ||| | || Sbjct 1838879 GAGGGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGGGG 1838938 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | || ||||| || | || || ||| || | | || | ||| | || || Sbjct 1838939 AATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGTTCTAC 1838998 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| ||||||||||| ||||||||||| |||||||||||||| Sbjct 1838999 TTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1839046 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 ||||| || |||| | || || || || | ||| || ||||||||||| || || Sbjct 1770787 TTTCCACCTCTCAGTCGAAGTACAAGATGGAGTGTGGATTCTTTCTGAATGTTGTAATCA 1770846 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || ||| | | |||| || ||||| || || || ||||| || |||||||| ||| | Sbjct 1770847 GAGAGGGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGG 1770906 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | || ||||| || | || || ||| || | | || | ||| | || Sbjct 1770907 GGAATTCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGTTCT 1770966 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||| ||||||||||| ||||||||||| |||||||||||||| Sbjct 1770967 ACTTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1771016 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| ||||| | || || || || | || || ||||||||||| || || || Sbjct 1771018 CCTCCTCTCAATCGAAGTACAAGATGGAGAGTTGATTCTTTCTGAATGTTGTAATCAGAG 1771077 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | | |||| || ||||| || || || ||||| || |||||||| ||| | || Sbjct 1771078 AGGGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGGGGA 1771137 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || ||||| || | || || ||| || | | || | ||| | || || Sbjct 1771138 ATTCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGTTCTACT 1771197 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| ||||||||||| ||||||||||| |||||||||||||| Sbjct 1771198 TCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1771244 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| ||||| | || || || || | || || ||||||||||| || || || Sbjct 1838592 CCTCCTCTCAATCGAAGTACAAGATGGAGAGTTGATTCTTTCTGAATGTTGTAATCAGAG 1838651 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | | |||| || ||||| || || || ||||| || |||||||| ||| | || Sbjct 1838652 AGGGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGGGGA 1838711 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || ||||| || | || || ||| || | | || | ||| | || || Sbjct 1838712 ATTCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTGTCAGCTGGTTCTACT 1838771 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| ||||||||||| ||||||||||| |||||||||||||| Sbjct 1838772 TCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1838818 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAA-TGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 ||||| ||||| | || || || || | || || | || ||||||||||| || || || Sbjct 1772158 CCTCCTCTCAATCGAAGTACAAGATGGAGTGTTGAT-TCTTTCTGAATGTTGTAATCAGA 1772216 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 ||| | | |||| || ||||| || || || ||||| || |||||||| ||| | || Sbjct 1772217 GAGGGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGGGG 1772276 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | || ||||| || | || || ||| || | | || | ||| | || || Sbjct 1772277 AATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGTTCTAC 1772336 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| ||||||||||| ||||| ||||| |||||||||||||| Sbjct 1772337 TTCGAGGGTGATGGTCTTTCCAGTGAGAGTCTTAACAAAGATCTGCAT 1772384 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| ||||| | || || || || | || || ||||| ||||| || || | Sbjct 1839046 TTCCTCCTCTCAATCGAAGTACAAGATGGAGTGTCGATTCTTTCTGGATGTTGTAATCAG 1839105 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | ||| | | |||| || ||||| || || || ||||| || |||||||| ||| | | Sbjct 1839106 AGAGGGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGGG 1839165 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || ||||| || | || || ||| || | | || | ||| | || | Sbjct 1839166 GAATTCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGTTCTA 1839225 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| ||||||||||| ||||||||||| |||||||||||||| Sbjct 1839226 CTTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1839274 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAA-TGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 ||||| ||||| | || || || || | || || | || ||||||||||| || || || Sbjct 1839276 CCTCCTCTCAATCGAAGTACAAGATGGAGTGTTGAT-TCTTTCTGAATGTTGTAATCAGA 1839334 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 ||| | | |||| || ||||| || || || ||||| || |||||||| ||| | || Sbjct 1839335 GAGGGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGGGG 1839394 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | || ||||| || | || || ||| || | | || | ||| | || || Sbjct 1839395 AATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGTTCTAC 1839454 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| ||||||||||| ||||| ||||| |||||||||||||| Sbjct 1839455 TTCGAGGGTGATGGTCTTTCCAGTGAGAGTCTTAACAAAGATCTGCAT 1839502 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| ||||| | || || || || | || || ||||| ||||| || || || Sbjct 1771702 CCTCCTCTCAATCGAAGTACAAGATGGAGTGTCGATTCTTTCTGGATGTTGTAATCAGAG 1771761 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | | |||| || ||||| || || || ||||| || |||||||| ||| | || Sbjct 1771762 AGGGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGGGGA 1771821 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || ||||| || | || || ||| || | | || | ||| | || || Sbjct 1771822 ATTCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGTTCTACT 1771881 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| ||||||||||| ||||||||||| |||||||||||||| Sbjct 1771882 TCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1771928 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| ||||| | || || || || | || || ||||| ||||| || || || Sbjct 1771930 CCTCCTCTCAATCGAAGTACAAGATGGAGTGTCGATTCTTTCTGGATGTTGTAATCAGAG 1771989 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | | |||| || ||||| || || || ||||| || |||||||| ||| | || Sbjct 1771990 AGGGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGGGGA 1772049 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || ||||| || | || || ||| || | | || | ||| | || || Sbjct 1772050 ATTCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGTTCTACT 1772109 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| ||||||||||| ||||||||||| |||||||||||||| Sbjct 1772110 TCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1772156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325675060836311