Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2445 150 1e-31 seq3036 145 6e-30 >seq2445 Length=2603117 Score = 150 bits (166), Expect = 1e-31 Identities = 161/210 (77%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||| ||| || |||||||||||||| ||||| || || | | || | | ||| || Sbjct 1078293 ACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGATAGTGTTCTACCATCTTCC 1078352 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | |||||| |||||| | ||||||||||| || || || |||||||| ||||| ||||| Sbjct 1078353 AATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACCTTCTTTATCTTG- 1078411 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||| | ||||||| |||| | || |||| |||| |||||||| || || ||||| Sbjct 1078412 AATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCAACTTCAAGGGTGATGGTTTT 1078471 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || || || |||||||| Sbjct 1078472 ACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078501 Score = 150 bits (166), Expect = 1e-31 Identities = 161/210 (77%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||| ||| || |||||||||||||| ||||| || || | | || | | ||| || Sbjct 1078749 ACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGATAGTGTTCTACCATCTTCC 1078808 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | |||||| |||||| | ||||||| ||| ||||| || |||||||| ||||| ||||| Sbjct 1078809 AATTGTTTACCAGCAAAGATCAATCGTTGTTGATCTGGGGGAATACCTTCTTTATCTTG- 1078867 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||| | ||||||| |||| | || |||| |||| |||||||| || || ||||| Sbjct 1078868 AATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCAACTTCAAGGGTGATGGTTTT 1078927 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || || || |||||||| Sbjct 1078928 ACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078957 Score = 150 bits (166), Expect = 1e-31 Identities = 183/246 (74%), Gaps = 5/246 (2%) Strand=Plus/Plus Query 29542 ACATCATTTTATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTT 29601 |||| |||||| || ||||| || || | || || | ||| || |||||||||||| Sbjct 1149394 ACATGATTTTAC---TGGCCTCCTCTTAATCTCAATACAAGATGGAGAGTGGATTCTTTT 1149450 Query 29602 TGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAAT 29661 || || || || || | || || | | ||| || | |||||| |||||| | |||||| Sbjct 1149451 TGGATATTGTAGTCTGAAAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAAT 1149510 Query 29662 CTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTAC 29720 ||||| || || || |||||||| ||||| ||||| |||||| | ||||||| |||| | Sbjct 1149511 CTTTGTTGGTCTGGGGGAATACCTTCTTTATCTTG-AATTTTAGCTTTGACATTTTCAAT 1149569 Query 29721 AGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATAT 29780 || || | |||| |||||||| || || ||||| ||||| || || || || || || Sbjct 1149570 GGTATCTGCTGGTTCAACTTCAAGGGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGAT 1149629 Query 29781 CTGCAT 29786 |||||| Sbjct 1149630 CTGCAT 1149635 Score = 147 bits (162), Expect = 2e-30 Identities = 157/205 (77%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 ||| || |||||||||||||| ||||| || || | | || | | ||| || | ||| Sbjct 1078070 ATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGATAGTGTTCTACCATCTTCCAATTG 1078129 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||| |||||| | ||||||||||| || || || |||||||| ||||| ||||| ||||| Sbjct 1078130 TTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACCTTCTTTATCTTG-AATTT 1078188 Query 29703 TTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAG 29761 | | ||||||| |||| | || |||| |||| |||||||| || || ||||| |||| Sbjct 1078189 TAGCTTTGACATTTTCAATGGTATCAGCTGGTTCAACTTCAAGGGTGATGGTTTTACCAG 1078248 Query 29762 TTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || || |||||||| Sbjct 1078249 TCAAAGTCTTGACGAAGATCTGCAT 1078273 Score = 145 bits (160), Expect = 6e-30 Identities = 161/212 (76%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 ||| || |||||||||||||| ||||| || || | || || | | ||| || | ||| Sbjct 1078982 ATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGAAAGTGTTCTACCATCTTCCAATTG 1079041 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||| |||||| | ||||||||||| || || || |||||||| ||||||||||| ||||| Sbjct 1079042 TTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACCTTCTTTGTCTTG-AATTT 1079100 Query 29703 TTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAG 29761 | | ||| ||| |||| | || |||| ||||||| || | || || ||||| |||| Sbjct 1079101 TAGTTTTAACATTTTCAATGGTATCAGCTGGTTCTACCTCTAAGGTGATGGTTTTACCAG 1079160 Query 29762 TTAAGGTTTTAACAAATATCTGCATTTTAAAA 29793 | || || || || || ||||||||| | ||| Sbjct 1079161 TCAATGTCTTGACGAAGATCTGCATTCTGAAA 1079192 Score = 141 bits (156), Expect = 7e-29 Identities = 156/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 ||| || || ||||||||||| ||||| || || | || || | | ||| || | ||| Sbjct 1078526 ATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCTGAAAGCGTTCTACCATCTTCCAATTG 1078585 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||| |||||| | ||||||||||| || || || |||||||| ||||| ||||| ||||| Sbjct 1078586 TTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACCTTCTTTATCTTG-AATTT 1078644 Query 29703 TTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAG 29761 | | ||||||| |||| | || |||| |||| ||||| ||||| || ||||| |||| Sbjct 1078645 TAGCTTTGACATTTTCAATGGTATCAGCTGGTTCAACTTCCAGAGTGATGGTTTTACCAG 1078704 Query 29762 TTAAGGTTTTAACAAATATCTGCAT 29786 | | || || || || |||||||| Sbjct 1078705 TCAGTGTCTTGACGAAGATCTGCAT 1078729 Score = 141 bits (156), Expect = 7e-29 Identities = 156/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 ||| || |||||||||||||| ||||| || || | || || | | ||| || | ||| Sbjct 1149660 ATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGAAAGTGTTCTACCATCTTCCAATTG 1149719 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||| |||||| | ||||||||||| || || || |||||||| ||||| ||||| ||||| Sbjct 1149720 TTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACCTTCTTTATCTTG-AATTT 1149778 Query 29703 TTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAG 29761 | | ||||||| |||| | || |||| ||||||| || | || || ||||| |||| Sbjct 1149779 TAGCTTTGACATTTTCAATGGTATCAGCTGGTTCTACCTCTAAGGTGATGGTTTTACCAG 1149838 Query 29762 TTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || || |||||||| Sbjct 1149839 TCAATGTCTTGACGAAAATCTGCAT 1149863 Score = 141 bits (156), Expect = 7e-29 Identities = 174/235 (74%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | || | || || | ||| || || ||||||||||| ||||| || || | | Sbjct 1149865 CCTCCTCGTAATCTCAATACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCTGAA 1149924 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || | |||||| |||||| | ||||||||||| || || || ||| Sbjct 1149925 AGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGA 1149984 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| ||||||||||| |||||| | ||| ||| |||| | || |||| ||||||| Sbjct 1149985 ATACCTTCTTTGTCTTG-AATTTTAGTTTTAACATTTTCAATGGTATCAGCTGGTTCTAC 1150043 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAA 29793 || | || || ||||| ||||| || || || || || ||||||||| | ||| Sbjct 1150044 CTCTAAGGTGATGGTTTTACCAGTCAATGTCTTGACGAAGATCTGCATTCTGAAA 1150098 >seq3036 Length=1877736 Score = 145 bits (160), Expect = 6e-30 Identities = 172/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| ||||| || || || | ||| || || |||||||| |||||||| ||||| | Sbjct 1772158 CCTCCTCTCAATCGAAGTACAAGATGGAGTGTTGATTCTTTCTGAATGTTGTAATCAGAG 1772217 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | ||| || |||||||| |||||| | || | | ||||||||| || ||| Sbjct 1772218 AGGGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGGGGA 1772277 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || || ||||| | || ||| ||| |||| | || |||| |||||||| Sbjct 1772278 ATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGTTCTACT 1772337 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAA 29792 || || || || || || ||||| | || |||||||| ||||||||||| || Sbjct 1772338 TCGAGGGTGATGGTCTTTCCAGTGAGAGTCTTAACAAAGATCTGCATTTTCAA 1772390 Score = 145 bits (160), Expect = 6e-30 Identities = 172/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| ||||| || || || | ||| || || |||||||| |||||||| ||||| | Sbjct 1839276 CCTCCTCTCAATCGAAGTACAAGATGGAGTGTTGATTCTTTCTGAATGTTGTAATCAGAG 1839335 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | ||| || |||||||| |||||| | || | | ||||||||| || ||| Sbjct 1839336 AGGGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGGGGA 1839395 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || || ||||| | || ||| ||| |||| | || |||| |||||||| Sbjct 1839396 ATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGTTCTACT 1839455 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAA 29792 || || || || || || ||||| | || |||||||| ||||||||||| || Sbjct 1839456 TCGAGGGTGATGGTCTTTCCAGTGAGAGTCTTAACAAAGATCTGCATTTTCAA 1839508 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 29556 TTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC 29615 || ||| || |||| || || || | ||| || ||||||||||| |||||||| ||||| Sbjct 1770786 TTTTCCACCTCTCAGTCGAAGTACAAGATGGAGTGTGGATTCTTTCTGAATGTTGTAATC 1770845 Query 29616 CGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGG 29675 | | ||| | ||| || |||||||| |||||| | || | | ||||||||| || Sbjct 1770846 AGAGAGGGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGG 1770905 Query 29676 CGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTC 29735 ||||| || || || ||||| | || ||| ||| |||| | || |||| |||| Sbjct 1770906 GGGAATTCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGTTC 1770965 Query 29736 TACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| || || || || || ||||| | ||| || ||||| |||||||| Sbjct 1770966 TACTTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1771016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385198218675129