Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2445 120 7e-22 seq1919 91.5 3e-13 >seq2445 Length=2603117 Score = 120 bits (132), Expect = 7e-22 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || ||||| |||||| ||||||| ||| |||| Sbjct 1078726 CAGATCTTCGTCAAGACACTGACTGGTAAAACCATCACTCTGGAAGTTGAACCAGCTGAT 1078667 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| ||| |||||||| |||||||| ||| || ||| || Sbjct 1078666 ACCATTGAAAATGTCAAAGCTAAA-ATTCAAGATAAAGAAGGTATTCCCCCAGACCAACA 1078608 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||| | ||||| || || || || ||||||||||| || || | | || |||||| | Sbjct 1078607 AAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACGCTTTCAGACTACAACAT 1078548 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||| ||||| || ||||| || ||||| || ||| | ||| Sbjct 1078547 CCAAAAAGAATCAACTCTCCATCTTGTATTAAGATTACGA 1078508 Score = 105 bits (116), Expect = 2e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || ||||| ||||| | ||||| ||| |||| Sbjct 1078270 CAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCTGAT 1078211 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| ||| |||||||| |||||||| ||| || ||| || Sbjct 1078210 ACCATTGAAAATGTCAAAGCTAAA-ATTCAAGATAAAGAAGGTATTCCCCCAGACCAACA 1078152 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||| | ||||| || || || || ||||||||||| || || | | || |||||| | Sbjct 1078151 AAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCAGACTACAACAT 1078092 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||| ||||| || ||||| || ||||| || ||| | ||| Sbjct 1078091 CCAAAAAGAATCCACTCTCCATCTTGTATTAAGATTACGA 1078052 Score = 105 bits (116), Expect = 2e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || ||||| ||||| || || || ||| |||| Sbjct 1149860 CAGATTTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACCAGCTGAT 1149801 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| ||| |||||||| |||||||| ||| || ||| || Sbjct 1149800 ACCATTGAAAATGTCAAAGCTAAA-ATTCAAGATAAAGAAGGTATTCCCCCAGACCAACA 1149742 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||| | ||||| || || || || ||||||||||| || || | | || |||||| | Sbjct 1149741 AAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTACAACAT 1149682 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||| ||||| || ||||| || ||||| || ||| | ||| Sbjct 1149681 CCAAAAAGAATCCACTCTCCATCTTGTATTAAGATTACGA 1149642 Score = 105 bits (116), Expect = 2e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || ||||| ||||| || || || ||| |||| Sbjct 1150088 CAGATCTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACCAGCTGAT 1150029 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||| | ||| |||||||| |||||||| ||| || ||| || Sbjct 1150028 ACCATTGAAAATGTTAAAACTAAA-ATTCAAGACAAAGAAGGTATTCCCCCAGACCAACA 1149970 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||| | ||||| || || || || ||||||||||| || || | | || |||||| | Sbjct 1149969 AAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTACAACAT 1149910 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||| ||||| || ||||| || ||||| |||||| | ||| Sbjct 1149909 CCAAAAAGAATCAACTCTCCATCTTGTATTGAGATTACGA 1149870 Score = 102 bits (112), Expect = 2e-16 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || ||||| ||||| | ||||| ||| |||| Sbjct 1078498 CAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCTGAT 1078439 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| ||| |||||||| |||||||| ||| || ||| || Sbjct 1078438 ACCATTGAAAATGTCAAAGCTAAA-ATTCAAGATAAAGAAGGTATTCCCCCAGACCAACA 1078380 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||| | ||||| || || || || ||||||||||| || || | | || |||||| | Sbjct 1078379 AAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCAGACTACAACAT 1078320 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||| ||||| || ||||| || || || || ||| | ||| Sbjct 1078319 CCAAAAAGAATCCACTCTCCATCTGGTATTAAGATTACGA 1078280 Score = 102 bits (112), Expect = 2e-16 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || ||||| ||||| || || || ||| |||| Sbjct 1079182 CAGATCTTCGTCAAGACATTGACTGGTAAAACCATCACCTTAGAGGTAGAACCAGCTGAT 1079123 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||| | ||| |||||||| |||||||| ||| || ||| || Sbjct 1079122 ACCATTGAAAATGTTAAAACTAAA-ATTCAAGACAAAGAAGGTATTCCCCCAGACCAACA 1079064 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||| | ||||| || || || || ||||||||||| || || | | || |||||| | Sbjct 1079063 AAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTACAACAT 1079004 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||| ||||| || ||||| || ||||| || ||| | ||| Sbjct 1079003 CCAAAAAGAATCCACTCTCCATCTTGTATTAAGATTACGA 1078964 Score = 100 bits (110), Expect = 7e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || ||||| ||||| | ||||| ||| | || Sbjct 1149632 CAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCAGAT 1149573 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| ||| |||||||| |||||||| ||| || ||| || Sbjct 1149572 ACCATTGAAAATGTCAAAGCTAAA-ATTCAAGATAAAGAAGGTATTCCCCCAGACCAACA 1149514 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||| | ||||| || || || || ||||||||||| || || | | || ||||| | Sbjct 1149513 AAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTTTCAGACTACAATAT 1149454 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||| ||||| || ||||| || ||||| |||||| Sbjct 1149453 CCAAAAAGAATCCACTCTCCATCTTGTATTGAGA 1149420 Score = 93.3 bits (102), Expect = 1e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || ||||| ||||| | ||||| ||| |||| Sbjct 1078954 CAGATCTTCGTCAAGACTTTGACTGGTAAAACCATCACCCTTGAAGTTGAACCAGCTGAT 1078895 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| ||| |||||||| |||||||| ||| || || || Sbjct 1078894 ACCATTGAAAATGTCAAAGCTAAA-ATTCAAGATAAAGAAGGTATTCCCCCAGATCAACA 1078836 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | || | ||||| || || || || ||||||||||| || || | | || |||||| | Sbjct 1078835 ACGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACACTATCAGACTACAACAT 1078776 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||| ||||| || ||||| || || || || ||| | ||| Sbjct 1078775 CCAAAAAGAATCCACTCTCCATCTGGTATTAAGATTACGA 1078736 >seq1919 Length=159031 Score = 91.5 bits (100), Expect = 3e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| | || || || || ||||| || || || ||| |||| Sbjct 44434 CAGATCTTCGTCAAAACATTGACTGGTAAGACCATCACCTTAGAGGTCGAACCAGCTGAT 44375 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| || ||||||||| |||||||| ||| || || || Sbjct 44374 ACCATAGAAAATGTCAAAGCCAA-GATTCAAGATAAAGAAGGCATTCCACCAGATCAACA 44316 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || | || || || |||||||| | |||||||| || ||| | | ||||||||| | Sbjct 44315 GCGATTGATTTTTGCTGGAAAGCAACTTGAAGATGGCAGAACTCTCTCGGATTACAACAT 44256 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||||||||| || || || || | || |||||| Sbjct 44255 CCAGAAAGAATCGACCCTCCATTTGGTATTGAGA 44222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181753130048949