Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1919 93.3 4e-14 seq2445 82.4 7e-11 >seq1919 Length=159031 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || |||||||| ||||| |||||||| | || || || || ||||||||||| | Sbjct 44211 CCTCCACGTAATCTCAATACCAAATGGAGGGTCGATTCTTTCTGGATGTTGTAATCCGAG 44270 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| | || || || ||||| || ||||| ||||| ||||| || || | ||| Sbjct 44271 AGAGTTCTGCCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCGCTGTTGATCTGGTGGA 44330 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC-GCTCGATTCCAC 35688 | || || || || ||||| || | | || | | || || ||| | ||| || Sbjct 44331 ATGCCTTCTTTATCTTGAATCTTGGCTTTGACATTTTCTATGGTATCAGCT-GGTTCGAC 44389 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||| || ||||| ||||| ||||| || || |||||||| Sbjct 44390 CTCTAAGGTGATGGTCTTACCAGTCAATGTTTTGACGAAGATCTGCAT 44437 >seq2445 Length=2603117 Score = 82.4 bits (90), Expect = 7e-11 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || || ||||| ||||| || | ||| | || || ||||| |||||||| || | Sbjct 1149865 CCTCCTCGTAATCTCAATACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCTGAA 1149924 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| | || |||| || ||||| ||||| ||||| | || ||||| | ||| Sbjct 1149925 AGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGA 1149984 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAG-AGTTGCCACCGTGTC-GCTCGATTCCA 35687 | | || ||||| ||| ||| | || | | || | | || || ||| | ||| | Sbjct 1149985 ATACCTTCTTTGTCT-TGAATTTTAGTTTTAACATTTTCAATGGTATCAGCTGG-TTCTA 1150042 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 |||| | ||||| |||||||| ||||| || || || || |||||||||||| Sbjct 1150043 CCTCTAAGGTGATGGTTTTACCAGTCAATGTCTTGACGAAGATCTGCATTCTG 1150095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450768417542520