Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2153 154 2e-32 seq2942 131 2e-25 >seq2153 Length=2898250 Score = 154 bits (170), Expect = 2e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 39999 CCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAA 40058 |||||||||||||||| || |||||||| || ||||| || |||| |||||| ||| | Sbjct 643482 CCAAATTTTCATTCACAATACCATCACTGGCAGCAAAGAAAGCCAGGACATGTGAAATGA 643541 Query 40059 AATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTT 40118 | | || ||| || ||| | || | ||| | | | | |||||| || | || |||| Sbjct 643542 AGTGTTGTTCTTCAGGTTTTAAAGCTTCCCAATGAATTAAATCTTTAGACAAGTCAACTT 643601 Query 40119 CTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATT 40178 ||||||| |||||||| || || || || ||||||||||| | ||| |||||| ||||| Sbjct 643602 CTTCAGCAGTCCAAAATGATGCTTCAGCTTTTTTGTACATTTGCCAGATATCATCATATT 643661 Query 40179 GTATTGGAAAAATAACAAATCTATTTGGATTTT 40211 | || || || || |||||||||| ||||||| Sbjct 643662 GAATAGGGAATATTACAAATCTATGGGGATTTT 643694 >seq2942 Length=2007428 Score = 131 bits (144), Expect = 2e-25 Identities = 175/239 (73%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566 |||||| ||||||||| || ||||| |||| || | || |||||||| |||||| Sbjct 1920169 ATATAGTTTTTCGAATTCTTCACCCCAGACATTTTCGAGGCCTGGACATTCCCCTGGACA 1920110 Query 69567 CATCAATGACCACACATCATCATCCTTA--ACTCGTTTCATAAATAGATCGGGAATCCAA 69624 |||||| | ||| ||| | ||| || ||||||||||||| ||| |||||||| Sbjct 1920109 CATCAAGGTCCAGTTTCCAT--TGCTTTCCACCCGTTTCATAAATAAATCAGGAATCCAC 1920052 Query 69625 AGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATC 69683 || || ||| || | |||||||| || | |||||| || || ||||| ||||| | ||| Sbjct 1920051 AGGGC-ATAGAATAAATCTCTGGCTCGCTGTTCTTCTTTACCAGTATTCTTTTTTAAATC 1919993 Query 69684 GAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTC 69742 | |||||| | || ||| | ||||||||||| | ||| || || | |||| |||| Sbjct 1919992 TAAAAACTCGAAAACATCTGCGTGCCATGGTTCAATATAGATAGCAAATGCTCCTGGTC 1919934 Score = 113 bits (124), Expect = 6e-20 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 || ||||| ||||| | ||||| | || || |||||||||||||| | ||| | || | Sbjct 1922577 TGGAATTCTCCAGACAGAACTCTTCTGGTATATATATTACTGGTATAGGCTTCTATAGCT 1922518 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 |||||||| || || || ||||| || || || |||||||| || |||| ||||||||| Sbjct 1922517 TCATTATTACCAAGTATCTGAGCTGTAGAGGCTGTTGGCATCGGCGCCATTAATAAACTA 1922458 Query 68839 TTTCTAAGACCATGT 68853 ||||| | ||||||| Sbjct 1922457 TTTCTTACACCATGT 1922443 Score = 102 bits (112), Expect = 1e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500 ||||| | ||||||||||| || |||| ||| |||| | || || || |||||||||| Sbjct 1923530 TCCATGCATAGAAATGCATGCTGGTTAATTTACCATAATTAGGTTCCGCAATATGAATAT 1923471 Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560 ||| ||| ||||| ||||| || ||||||||| ||| || ||||| || || | | | | Sbjct 1923470 TCAACGACTGACTCTGATCAATATAAGCTCCTCGATCGGCGGCCATCTTGATCACAGTTT 1923411 Query 68561 TTTGAGGAATTTCCCA 68576 |||| |||||||| Sbjct 1923410 TTTGGCTGATTTCCCA 1923395 Score = 100 bits (110), Expect = 4e-16 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 69316 TATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTA 69375 |||| | |||||||||||| || ||||||||||||||||| || || ||||| ||||| Sbjct 1920696 TATTCCACTATCTCTGTACAAAGGTTACTACATTTGATAGTACCAAGGTTTTGTTGATTT 1920637 Query 69376 CTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGAT 69435 ||| |||||||| || || || | || | || |||||||| ||| |||||||| Sbjct 1920636 GATTTTCTGTTACAGCTATCTTTATATAACATGTATGGTGTACCAGTCTCAGTCTGAGAT 1920577 Query 69436 TCGATAATAG 69445 || || |||| Sbjct 1920576 TCTATTATAG 1920567 Score = 93.3 bits (102), Expect = 6e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 68947 GATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAAT 69006 || || || || ||| ||| | || || | || |||||||||||||| | ||||| Sbjct 1921864 GAACCTTTGTAAGTTGAATATGCCCCGTCTTTCTCGGCTAGTTCACAACTGGATTCTAAC 1921805 Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066 ||| |||||||||| | || || ||| |||||| | || || ||||| |||| || Sbjct 1921804 GCAGCGTAATAAATATTCTCAAAGATCAACTTATTTAACTCCTGGGCTTCCTGACTCTCA 1921745 Query 69067 AATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAAC-CCCAATACCGATAGG 69125 |||||||| | | ||||| || ||||| || || || || |||||| ||||| || Sbjct 1921744 AATGGATATCTCATTAATATAAAGGCGTCTGCTAACCCTTGGACACCCAAT-CCGATTGG 1921686 Query 69126 TCTATGTCTCTTATTTGA 69143 | ||||||| | || || Sbjct 1921685 ACGATGTCTCATGTTGGA 1921668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686870427557160