Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2445 86.0 5e-12 seq1919 84.2 2e-11 >seq2445 Length=2603117 Score = 86.0 bits (94), Expect = 5e-12 Identities = 162/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GC 27078 |||||| | || | |||||| | ||| | || || |||||||| ||||||||||| | Sbjct 1149408 GCCTCCTCTTAATCTCAATACAAGATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGA 1149467 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 |||| | | ||||| | |||||||| || | || | | ||||| || || | Sbjct 1149468 AAGTGTT-CTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGG 1149526 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||| |||||||| || || ||| | |||| | || |||| | ||||| Sbjct 1149527 GAATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCTGCTGGTTCAA 1149586 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 |||| || || || | ||| || |||| ||| || || ||||| |||||| || || Sbjct 1149587 CTTCAAGGGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCATACCTCCT 1149642 >seq1919 Length=159031 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || || | |||||||||||| | || || ||||| || || ||||| || Sbjct 44211 CCTCCACGTAATCTCAATACCAAATGGAGGGTCGATTCTTTCTGGATGTTGTAATCCGAG 44270 Query 27081 AT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || | ||||| || || || || || |||| | ||||||||||| || || Sbjct 44271 AGAGTTCTGC-CATCTTCAAGTTGCTTTCCAGCAAAAATCAATCGCTGTTGATCTGGTGG 44329 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || |||||||| |||||| ||| | |||||| || || | | ||| || Sbjct 44330 AATGCCTTCTTTATCTTGAATCTTGGCTTTGACATTTTCTATGGTATCAGCTGGTTCGAC 44389 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||| || || | || || |||| ||||| || ||||| ||||| Sbjct 44390 CTCTAAGGTGATGGTCTTACCAGTCAATGTTTTGACGAAGATCTGCAT 44437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424911255549528