Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq1613 167 3e-36 >seq1613 Length=3625785 Score = 167 bits (184), Expect = 3e-36 Identities = 307/442 (69%), Gaps = 6/442 (1%) Strand=Plus/Minus Query 32603 AGGATATAGTTATATATGCCAGCCTATTGA-TTACTCTGAAGA-CATCTATGAAATCAGA 32660 ||||||||||||| | ||||| || | ||| ||| | | || ||| ||||||| ||| Sbjct 2860075 AGGATATAGTTATTTGTGCCAACC-AGTGAGTTATACATATGATCATA-ATGAAATGAGA 2860018 Query 32661 ATAGCCAGAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGA-ATATCTAGATACTAT 32719 ||||||| || ||||||| | || | ||||||||| |||| || | |||| ||| | Sbjct 2860017 ATAGCCAAGGCATTGTGGTGGTTTTATTTCTCTAAAGTGCTAGAGATGT-TAGACACTGT 2859959 Query 32720 TTTCTTCATAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTT 32779 || || || | | |||||| |||||||||||| ||| | || || ||||| ||| Sbjct 2859958 GTTTTTTATTTTACGTAAGAAAAATAACCAAGTTAGTTTTCTTCATGTTTACCATCATGC 2859899 Query 32780 TACCATGTTTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAGGCATTTTT 32839 ||||||||| || | | ||||| || || |||||| | |||||||| ||| | || || Sbjct 2859898 AACCATGTTTCCTATTTGGTGGATTGGAATCAAATGGGTAGCAGGAGGTCAGTCTTTCTT 2859839 Query 32840 TGGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGTTATTACGGATTAACAGC 32899 ||| || ||| || || || |||||||| | ||||| | || |||||| | | || Sbjct 2859838 TGGGGCCATGATGAACTCCTTCATACATGTATTGATGTACACCTACTACGGAGTTTCTGC 2859779 Query 32900 AATAGGTCCTTCCTTGCGAAAATATCTATGGTGGAAAAAATATTTAACTATCATACAATT 32959 |||| || || | || ||| |||||||||||| ||| | || | || ||| | Sbjct 2859778 CTTAGGGCCACAATTTCAGAAGTATTTATGGTGGAAAAGATACCTGACAAAAATCCAACT 2859719 Query 32960 GATGCAGTTTCATTTAGCAATAGGTCATACAGCAATGTCTATATATATAGATTGTCCGTT 33019 || ||||| | | | ||| ||| | | | ||| || | | |||||| ||| Sbjct 2859718 GACTCAGTTCTGTATTGGAATCACCCATGCTGTACAGTCCTTAGTTTTTGATTGTGAGTT 2859659 Query 33020 CCCTAGATGGATACAGTGGGCT 33041 || |||||| || |||||| Sbjct 2859658 TCCAGCATGGATGCACTGGGCT 2859637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603147104812560