Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq3036 172 1e-37 seq2445 141 2e-28 >seq3036 Length=1877736 Score = 172 bits (190), Expect = 1e-37 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || || || || ||||| || ||||| ||||| | ||||| || |||||| Sbjct 1772173 AGTACAAGATGGAGTGTTGATTCTTTCTGAATGTTGTAATCAGAGAGGGTTCTGCCATCT 1772232 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || || || || |||||||| ||||| || || || |||| |||||||| || Sbjct 1772233 TCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATACCTTCCTTATCT 1772292 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||| || ||||| ||||| |||| ||| || ||||| ||||| ||| Sbjct 1772293 TGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGTTCTACTTCGAGGGTGATGGTC 1772352 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||||||||| ||||| | ||||||||| Sbjct 1772353 TTTCCAGTGAGAGTCTTAACAAAGATCTGCATTTT 1772387 Score = 172 bits (190), Expect = 1e-37 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || || || || ||||| || ||||| ||||| | ||||| || |||||| Sbjct 1839291 AGTACAAGATGGAGTGTTGATTCTTTCTGAATGTTGTAATCAGAGAGGGTTCTGCCATCT 1839350 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || || || || |||||||| ||||| || || || |||| |||||||| || Sbjct 1839351 TCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATACCTTCCTTATCT 1839410 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||| || ||||| ||||| |||| ||| || ||||| ||||| ||| Sbjct 1839411 TGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGTTCTACTTCGAGGGTGATGGTC 1839470 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||||||||| ||||| | ||||||||| Sbjct 1839471 TTTCCAGTGAGAGTCTTAACAAAGATCTGCATTTT 1839505 >seq2445 Length=2603117 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| ||||| || ||||| || |||||||||||||| || || | ||| || || || Sbjct 1078514 TCTTAATACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCTGAAAGCGTTCTACC 1078573 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| || || || || ||||| | | ||||||||| || |||| ||||| || Sbjct 1078574 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACCTTCTTT 1078633 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || || || || ||| || ||||| ||||| |||| |||||| || |||||||| Sbjct 1078634 ATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCAACTTCCAGAGTGAT 1078693 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || ||||| || || | |||||| Sbjct 1078694 GGTTTTACCAGTCAGTGTCTTGACGAAGATCTGCAT 1078729 Score = 140 bits (154), Expect = 8e-28 Identities = 161/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| ||||| || |||||||| |||||||||||||| || || | ||| || || || Sbjct 1078970 TCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGAAAGTGTTCTACC 1079029 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| || || || || ||||| | | ||||||||| || |||| ||||| || Sbjct 1079030 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACCTTCTTT 1079089 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || || || ||| || ||||| ||||| |||| ||| ||||| | ||||| Sbjct 1079090 GTCTTGAATTTTAGTTTTAACATTTTCAATGGTATCAGCTGGTTCTACCTCTAAGGTGAT 1079149 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || || | ||||| || || | ||||||| Sbjct 1079150 GGTTTTACCAGTCAATGTCTTGACGAAGATCTGCATT 1079186 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| ||||| || |||||||| |||||||||||||| || || | || || || || Sbjct 1078058 TCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGATAGTGTTCTACC 1078117 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| || || || || ||||| | | ||||||||| || |||| ||||| || Sbjct 1078118 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACCTTCTTT 1078177 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || || || || ||| || ||||| ||||| |||| |||||| || || ||||| Sbjct 1078178 ATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCAACTTCAAGGGTGAT 1078237 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | |||||| || || | |||||| Sbjct 1078238 GGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078273 Score = 132 bits (146), Expect = 1e-25 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| || || || |||||||| |||||||||||||| || || | || || || || Sbjct 1078286 TCTTAATACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGATAGTGTTCTACC 1078345 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| || || || || ||||| | | ||||||||| || |||| ||||| || Sbjct 1078346 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACCTTCTTT 1078405 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || || || || ||| || ||||| ||||| |||| |||||| || || ||||| Sbjct 1078406 ATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCAACTTCAAGGGTGAT 1078465 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | |||||| || || | |||||| Sbjct 1078466 GGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078501 Score = 132 bits (146), Expect = 1e-25 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| || || || |||||||| |||||||||||||| || || | || || || || Sbjct 1078742 TCTTAATACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGATAGTGTTCTACC 1078801 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| || || || || ||||| | |||||||| || || |||| ||||| || Sbjct 1078802 ATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCTGGGGGAATACCTTCTTT 1078861 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || || || || ||| || ||||| ||||| |||| |||||| || || ||||| Sbjct 1078862 ATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCAACTTCAAGGGTGAT 1078921 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | |||||| || || | |||||| Sbjct 1078922 GGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078957 Score = 132 bits (146), Expect = 1e-25 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| ||||| || |||||||| |||||||||||||| || || | ||| || || || Sbjct 1149648 TCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGAAAGTGTTCTACC 1149707 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| || || || || ||||| | | ||||||||| || |||| ||||| || Sbjct 1149708 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACCTTCTTT 1149767 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || || || || ||| || ||||| ||||| |||| ||| ||||| | ||||| Sbjct 1149768 ATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTCTACCTCTAAGGTGAT 1149827 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | ||||| || || | |||||| Sbjct 1149828 GGTTTTACCAGTCAATGTCTTGACGAAAATCTGCAT 1149863 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 ||||| || ||||| || |||||||||||||| || || | ||| || || ||||||||| Sbjct 1149883 ACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCTGAAAGTGTTCTACCATCTTCC 1149942 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 | || || || || ||||| | | ||||||||| || |||| ||||| ||||| || Sbjct 1149943 AATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGA 1150002 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 || || ||| || ||||| ||||| |||| ||| ||||| | ||||| || || Sbjct 1150003 ATTTTAGTTTTAACATTTTCAATGGTATCAGCTGGTTCTACCTCTAAGGTGATGGTTTTA 1150062 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || | ||||| || || | ||||||| Sbjct 1150063 CCAGTCAATGTCTTGACGAAGATCTGCATT 1150092 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 ||||| || |||||||| ||||||||||| || || || | ||| || || ||||||||| Sbjct 1149427 ACAAGATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAAAGTGTTCTACCATCTTCC 1149486 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 | || || || || ||||| | | ||||||||| || |||| ||||| || || || Sbjct 1149487 AATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATACCTTCTTTATCTTGA 1149546 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 || || ||| || ||||| ||||| || | |||||| || || ||||| || || Sbjct 1149547 ATTTTAGCTTTGACATTTTCAATGGTATCTGCTGGTTCAACTTCAAGGGTGATGGTTTTA 1149606 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || | |||||| || || | |||||| Sbjct 1149607 CCAGTCAAAGTCTTGACGAAGATCTGCAT 1149635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159085628043185