Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq2445 104 2e-17 >seq2445 Length=2603117 Score = 104 bits (114), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || ||||| |||||||| || | || | ||| ||||||||||| || ||||| || | Sbjct 1078959 CCTCCTCGTAATCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGAA 1079018 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| | ||||||||||||||| || ||| | || | |||||||||||| ||| Sbjct 1079019 AGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGA 1079078 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGT- 101190 | ||||||||||| |||||| ||| |||| | | || || | | ||| | Sbjct 1079079 ATACCTTCTTTGTCTTGAATTTTAGTTTTAACATTTTCAATGGTATCAGCTG--GTTCTA 1079136 Query 101191 -TTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || | ||| || ||||| || |||||||| || | || || |||||| Sbjct 1079137 CCTCTAAGGTGATGGTTTTACCAGTCAATGTCTTGACGAAGATCTGCATT 1079186 Score = 104 bits (114), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || ||||| ||||| || || | || | ||||||||||||||| || ||||| || | Sbjct 1149865 CCTCCTCGTAATCTCAATACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCTGAA 1149924 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| | ||||||||||||||| || ||| | || | |||||||||||| ||| Sbjct 1149925 AGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGA 1149984 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGT- 101190 | ||||||||||| |||||| ||| |||| | | || || | | ||| | Sbjct 1149985 ATACCTTCTTTGTCTTGAATTTTAGTTTTAACATTTTCAATGGTATCAGCTG--GTTCTA 1150042 Query 101191 -TTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || | ||| || ||||| || |||||||| || | || || |||||| Sbjct 1150043 CCTCTAAGGTGATGGTTTTACCAGTCAATGTCTTGACGAAGATCTGCATT 1150092 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || ||||| |||||||| || | || | ||| ||||||||||| || ||||| || | Sbjct 1149637 CCTCCTCGTAATCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTGAA 1149696 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| | ||||||||||||||| || ||| | || | |||||||||||| ||| Sbjct 1149697 AGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGA 1149756 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGT- 101190 | |||||||| || |||||| ||| |||| | | || || | | ||| | Sbjct 1149757 ATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTG--GTTCTA 1149814 Query 101191 -TTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || | ||| || ||||| || |||||||| || | ||||| ||||| Sbjct 1149815 CCTCTAAGGTGATGGTTTTACCAGTCAATGTCTTGACGAAAATCTGCAT 1149863 Score = 100 bits (110), Expect = 2e-16 Identities = 117/156 (75%), Gaps = 4/156 (3%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || ||||| |||||||| |||| || | ||| ||||||||||| || ||||| || | Sbjct 1078275 CCTCCTCGTAATCTTAATACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTG-- 1078332 Query 101072 ATAGTTTTGGA--ATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGG 101129 ||||| || | ||||||||||||||| || ||| | || | |||||||||||| || Sbjct 1078333 ATAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGG 1078392 Query 101130 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACAT 101165 | | |||||||| || |||||| ||| |||| Sbjct 1078393 GAATACCTTCTTTATCTTGAATTTTAGCTTTGACAT 1078428 Score = 98.7 bits (108), Expect = 8e-16 Identities = 117/157 (75%), Gaps = 4/157 (3%) Strand=Plus/Plus Query 101011 GCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGC 101070 ||| ||||| |||||||| || | || | ||| ||||||||||| || ||||| || | Sbjct 1078046 GCCTCCTCGTAATCTTAATACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTG- 1078104 Query 101071 CATAGTTTTGGA--ATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACG 101128 ||||| || | ||||||||||||||| || ||| | || | |||||||||||| | Sbjct 1078105 -ATAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGG 1078163 Query 101129 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACAT 101165 || | |||||||| || |||||| ||| |||| Sbjct 1078164 GGAATACCTTCTTTATCTTGAATTTTAGCTTTGACAT 1078200 Score = 98.7 bits (108), Expect = 8e-16 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || ||||| |||||||| || | || | ||||||||||||||| || ||||| || | Sbjct 1078503 CCTCCTCGTAATCTTAATACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCTGAA 1078562 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| | ||||||||||||||| || ||| | || | |||||||||||| ||| Sbjct 1078563 AGCGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGGA 1078622 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACAT 101165 | |||||||| || |||||| ||| |||| Sbjct 1078623 ATACCTTCTTTATCTTGAATTTTAGCTTTGACAT 1078656 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 101011 GCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGC 101070 ||| |||| ||||| || || | || | ||| ||||||||||| |||||||| || | Sbjct 1149408 GCCTCCTCTTAATCTCAATACAAGATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGA 1149467 Query 101071 CATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGG 101130 | ||| | ||||||||||||||| || ||| | || | |||||||||||| ||| Sbjct 1149468 AAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGGGG 1149527 Query 101131 CACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT-- 101188 | |||||||| || |||||| ||| |||| | | || |||| | ||| Sbjct 1149528 AATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCTGCTG--GTTCA 1149585 Query 101189 GTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | ||| || ||||| || ||||| || || | || || ||||| Sbjct 1149586 ACTTCAAGGGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1149635 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/156 (74%), Gaps = 4/156 (3%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || ||||| |||||||| |||| || | ||| ||||||||||| || ||||| || | Sbjct 1078731 CCTCCTCGTAATCTTAATACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCTG-- 1078788 Query 101072 ATAGTTTTGGA--ATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGG 101129 ||||| || | ||||||||||||||| || ||| | || | | |||||| ||| || Sbjct 1078789 ATAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCTGGGG 1078848 Query 101130 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACAT 101165 | | |||||||| || |||||| ||| |||| Sbjct 1078849 GAATACCTTCTTTATCTTGAATTTTAGCTTTGACAT 1078884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409638487440471