Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2153 156 4e-33 >seq2153 Length=2898250 Score = 156 bits (172), Expect = 4e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 4931 TACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATAT 4990 ||| || ||||| || || ||||| |||||||| ||||| || |||| ||||| || || Sbjct 643480 TACCAAATTTTCATTCACAATACCATCACTGGCAGCAAAGAAAGCCAGGACATGTGAAAT 643539 Query 4991 AAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAAC 5050 |||| ||||| ||||| || | || ||| || |||||||||| || ||||| Sbjct 643540 GAAGTGTTGTTCTTCAGGTTTTAAAGCTTCCCAATGAATTAAATCTTTAGACAAGTCAAC 643599 Query 5051 TTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATA 5110 ||||||| |||||||||| || ||||| |||||||||||||| ||| |||||| ||| Sbjct 643600 TTCTTCAGCAGTCCAAAATGATGCTTCAGCTTTTTTGTACATTTGCCAGATATCATCATA 643659 Query 5111 CTGAATCGGAAGTATGACAAATCT 5134 ||||| || | ||| |||||||| Sbjct 643660 TTGAATAGGGAATATTACAAATCT 643683 Score = 132 bits (146), Expect = 4e-26 Identities = 148/195 (76%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436 |||| ||||||||||||||| ||||| || ||||||| || ||||| || ||||||||| Sbjct 642147 AATCTGTCAGCTACAAATTCAATATATTGCTTCATGAGATCACAGTTCATACCAATTAAT 642206 Query 4437 CTCACA-GGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495 | ||| |||| || | || ||||| |||||||| || ||| || || || ||||| Sbjct 642207 -TTACATGGTAAAGCATCAGTTAAAAATTCTTGTTCAATTTGTACTGCATCAGTAATTAT 642265 Query 4496 ATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAA 4555 | | | ||| | || | ||| | ||||||||||| | || ||| |||||| ||||| Sbjct 642266 ACCATAAATTCTTTCCTGTGATAGCTTATTTACTAAATGTCTGTACATTAAACAGGCAAA 642325 Query 4556 ATCACAATGCAAACC 4570 ||||||||| | ||| Sbjct 642326 ATCACAATGTAGACC 642340 Score = 122 bits (134), Expect = 7e-23 Identities = 167/230 (73%), Gaps = 5/230 (2%) Strand=Plus/Plus Query 4565 CAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCT 4624 ||||||| |||||| || |||||||| ||| || ||||| || ||||||| ||| | Sbjct 642606 CAAACCT-CGTCTCGACTGATCAGTTCATTACTGAAGGTTAAACCAGGCATTATACCACG 642664 Query 4625 CTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGC 4684 ||| || | ||||||||||| ||||||||| ||||| ||||| || ||||| ||||| || Sbjct 642665 CTTCTTCAACCAAAATATAGAGGCAAATGAACCAGAGAAGAAAATTCCTTCAACGGCAGC 642724 Query 4685 AAACGCTACTAATCGGGACCCGAACGAGCTG--GCTTTGTCTTTAATCCATTTTAATGCC 4742 ||| || || | || | ||| ||| ||| || ||||||||||| ||| Sbjct 642725 AAAAGCAACAACTC--TTTCTGAATAGTCTGCCTCTTCATCACCAATCCATTTTAGAGCC 642782 Query 4743 CAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAA 4792 |||| || || || || || || || | ||| | ||||| || ||||| Sbjct 642783 CAGTCTGCCTTCTTTTTTACACAGGGTAATGTTTCAATAGCATTGAATAA 642832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427026340343177