Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq2153 134 1e-26 >seq2153 Length=2898250 Score = 134 bits (148), Expect = 1e-26 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 23896 AAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAA 23955 |||||||| || |||||||||||||| |||||||||||||| || |||| | || || Sbjct 643484 AAATTTTCATTCACAATACCATCACTGGCAGCAAAGAAAGCCAGGACATGTGAAATGAAG 643543 Query 23956 TGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCA 24015 ||| ||| |||| | ||| || ||||| | | | |||||| || || |||||||| Sbjct 643544 TGTTGTTCTTCAGGTTTTAAAGCTTCCCAATGAATTAAATCTTTAGACAAGTCAACTTCT 643603 Query 24016 TCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGT 24075 ||| | |||||||| ||| || || |||||| |||| ||||||| || ||| Sbjct 643604 TCAGCAGTCCAAAATGATGCTTCAGCTTTTTTGTACATTTGCCAGATATCATCATATTGA 643663 Query 24076 ATTGGAAATATTACGAATCTAT 24097 || || |||||||| ||||||| Sbjct 643664 ATAGGGAATATTACAAATCTAT 643685 Score = 100 bits (110), Expect = 3e-16 Identities = 142/198 (72%), Gaps = 14/198 (7%) Strand=Plus/Plus Query 23341 CTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTT 23400 || || |||||||||||||||||||| ||| | |||| |||| ||||| |||| ||| Sbjct 642150 CTGTCAGCTACAAATTCAATATATTGCTTCATGAGATCACAGTTCATACCAATTAATTTA 642209 Query 23401 ACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGA 23460 ||| | |||||| ||| ||| || |||||| || ||||| ||||||| Sbjct 642210 CATGGTAAAGCATCAGTTAAAAATTCTTGTTCAATTTGTACTGCATCAGTAATTAT---- 642265 Query 23461 ACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAA-------ACAATAAACATGC 23513 || |||| ||||| || || |||| ||| |||| || ||| |||||| || Sbjct 642266 ACCATAAATTCTTTCCT--GT-GATAGCTTATTTACTAAATGTCTGTACATTAAACAGGC 642322 Query 23514 AAAATCACAATGTAGGCC 23531 ||||||||||||||| || Sbjct 642323 AAAATCACAATGTAGACC 642340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521458868376600