Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq3036 105 5e-18 seq1919 87.8 1e-12 seq2445 84.2 2e-11 >seq3036 Length=1877736 Score = 105 bits (116), Expect = 5e-18 Identities = 163/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168 |||| |||||||||| | || || || || ||| || || || ||||||||||| | Sbjct 1770788 TTCCACCTCTCAGTCGAAGTACAAGATGGAGTGTGGATTCTTTCTGAATGTTGTAATCAG 1770847 Query 44169 CGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||| || || | || || || || || || |||||||| | ||| |||||||||| Sbjct 1770848 AGAG--GGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGG 1770905 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| || ||||| || | || | ||||| || || | ||| Sbjct 1770906 GGGAATTCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGTTC 1770965 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | || || |||||||| ||||||||||| || ||||| ||||| Sbjct 1770966 TACTTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1771016 Score = 104 bits (114), Expect = 2e-17 Identities = 164/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| ||||||| || | || || || || || || || |||||||||||||| Sbjct 1839044 CATTCCTCCTCTCAATCGAAGTACAAGATGGAGTGTCGATTCTTTCTGGATGTTGTAATC 1839103 Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||| || || | || || || || || || |||||||| | ||| ||||||||| Sbjct 1839104 AGAGAG--GGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCT 1839161 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | || | |||||||| || ||||| || | || | ||||| || || | | Sbjct 1839162 GGGGGAATTCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGT 1839221 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | || || |||||||| ||||||||||| || ||||| ||||| Sbjct 1839222 TCTACTTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1839274 Score = 100 bits (110), Expect = 2e-16 Identities = 163/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| ||||||| || | || || || || || || || || ||||||||||| Sbjct 1771470 CATTCCTCCTCTCAATCGAAGTACAAGATGGAGTGTTGATTCTTTCTGAATGTTGTAATC 1771529 Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||| || || | || || || || || || |||||||| | ||| ||||||||| Sbjct 1771530 AGAGAG--GGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCT 1771587 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | || | |||||||| || ||||| || | || | ||||| || || | | Sbjct 1771588 GGGGGAATTCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGT 1771647 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | || || |||||||| ||||||||||| || ||||| ||||| Sbjct 1771648 TCTACTTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1771700 Score = 100 bits (110), Expect = 2e-16 Identities = 163/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| || | || || || || || || || |||||||||||||| Sbjct 1771698 CATACCTCCTCTCAATCGAAGTACAAGATGGAGTGTCGATTCTTTCTGGATGTTGTAATC 1771757 Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||| || || | || || || || || || |||||||| | ||| ||||||||| Sbjct 1771758 AGAGAG--GGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCT 1771815 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | || | |||||||| || ||||| || | || | ||||| || || | | Sbjct 1771816 GGGGGAATTCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGT 1771875 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | || || |||||||| ||||||||||| || ||||| ||||| Sbjct 1771876 TCTACTTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1771928 Score = 100 bits (110), Expect = 2e-16 Identities = 163/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| || | || || || || || || || |||||||||||||| Sbjct 1771926 CATACCTCCTCTCAATCGAAGTACAAGATGGAGTGTCGATTCTTTCTGGATGTTGTAATC 1771985 Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||| || || | || || || || || || |||||||| | ||| ||||||||| Sbjct 1771986 AGAGAG--GGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCT 1772043 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | || | |||||||| || ||||| || | || | ||||| || || | | Sbjct 1772044 GGGGGAATTCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGT 1772103 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | || || |||||||| ||||||||||| || ||||| ||||| Sbjct 1772104 TCTACTTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1772156 Score = 100 bits (110), Expect = 2e-16 Identities = 163/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| || | || || || || || || || || ||||||||||| Sbjct 1838588 CATACCTCCTCTCAATCGAAGTACAAGATGGAGAGTTGATTCTTTCTGAATGTTGTAATC 1838647 Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||| || || | || || || || || || |||||||| | ||| ||||||||| Sbjct 1838648 AGAGAG--GGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCT 1838705 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | || | |||||||| || ||||| || | || | |||||||| || | | Sbjct 1838706 GGGGGAATTCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTGTCAGCTGGT 1838765 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | || || |||||||| ||||||||||| || ||||| ||||| Sbjct 1838766 TCTACTTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1838818 Score = 100 bits (110), Expect = 2e-16 Identities = 163/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| || | || || || || || || || || ||||||||||| Sbjct 1838816 CATACCTCCTCTCAATCGAAGTACAAGATGGAGTGTTGATTCTTTCTGAATGTTGTAATC 1838875 Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||| || || | || || || || || || |||||||| | ||| ||||||||| Sbjct 1838876 AGAGAG--GGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCT 1838933 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | || | ||||||||| || ||||| || | || | ||||| || || | | Sbjct 1838934 GGGGGAATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGT 1838993 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | || || |||||||| ||||||||||| || ||||| ||||| Sbjct 1838994 TCTACTTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1839046 Score = 95.1 bits (104), Expect = 9e-15 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| || | || || || || || || || || ||||||||||| Sbjct 1771014 CATACCTCCTCTCAATCGAAGTACAAGATGGAGAGTTGATTCTTTCTGAATGTTGTAATC 1771073 Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||| || || | || || || || || || |||||||| | ||| ||||||||| Sbjct 1771074 AGAGAG--GGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCT 1771131 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | || | |||||||| || ||||| || | || | ||||| || || | | Sbjct 1771132 GGGGGAATTCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGT 1771191 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | || || |||||||| ||||||||||| || ||||| ||||| Sbjct 1771192 TCTACTTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1771244 Score = 95.1 bits (104), Expect = 9e-15 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| || | || || || || || || || || ||||||||||| Sbjct 1771242 CATACCTCCTCTCAATCGAAGTACAAGATGGAGTGTTGATTCTTTCTGAATGTTGTAATC 1771301 Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||| || || | || || || || || || |||||||| | ||| ||||||||| Sbjct 1771302 AGAGAG--GGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCT 1771359 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | || | |||||||| || ||||| || | || | ||||| || || | | Sbjct 1771360 GGGGGAATTCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGT 1771419 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | || || |||||||| ||||||||||| || ||||| ||||| Sbjct 1771420 TCTACTTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 1771472 Score = 95.1 bits (104), Expect = 9e-15 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| || | || || || || || || || || ||||||||||| Sbjct 1772154 CATACCTCCTCTCAATCGAAGTACAAGATGGAGTGTTGATTCTTTCTGAATGTTGTAATC 1772213 Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||| || || | || || || || || || |||||||| | ||| ||||||||| Sbjct 1772214 AGAGAG--GGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCT 1772271 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | || | ||||||||| || ||||| || | || | ||||| || || | | Sbjct 1772272 GGGGGAATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGT 1772331 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | || || |||||||| ||||| ||||| || ||||| ||||| Sbjct 1772332 TCTACTTCGAGGGTGATGGTCTTTCCAGTGAGAGTCTTAACAAAGATCTGCAT 1772384 Score = 95.1 bits (104), Expect = 9e-15 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| || | || || || || || || || || ||||||||||| Sbjct 1839272 CATACCTCCTCTCAATCGAAGTACAAGATGGAGTGTTGATTCTTTCTGAATGTTGTAATC 1839331 Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||| || || | || || || || || || |||||||| | ||| ||||||||| Sbjct 1839332 AGAGAG--GGTTCTGCCATCTTCTAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCT 1839389 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | || | ||||||||| || ||||| || | || | ||||| || || | | Sbjct 1839390 GGGGGAATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTATCAGCTGGT 1839449 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | || || |||||||| ||||| ||||| || ||||| ||||| Sbjct 1839450 TCTACTTCGAGGGTGATGGTCTTTCCAGTGAGAGTCTTAACAAAGATCTGCAT 1839502 >seq1919 Length=159031 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 44122 TCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTC 44181 |||||| |||| || || || || || |||||||||||||| | ||| | | Sbjct 44222 TCTCAATACCAAATGGAGGGTCGATTCTTTCTGGATGTTGTAATCCGAGAGAGTTCTGCC 44281 Query 44182 GTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTT 44241 || || || ||||| || ||||| ||||| ||||| ||||||| || | ||||| || Sbjct 44282 ATCTTCAAGTTGCTTTCCAGCAAAAATCAATCGCTGTTGATCTGGTGGAATGCCTTCTTT 44341 Query 44242 TTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAAT 44301 || ||||| || | || ||||||| || || | ||| ||||| | || || Sbjct 44342 ATCTTGAATCTTGGCTTTGACATTTTCTATGGTATCAGCTGGTTCGACCTCTAAGGTGAT 44401 Query 44302 CGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || || | || || |||||||| ||||| Sbjct 44402 GGTCTTACCAGTCAATGTTTTGACGAAGATCTGCAT 44437 >seq2445 Length=2603117 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| | ||| || ||||| || || ||| || |||||||||||||| || Sbjct 1078727 CATACCTCCTCGTAATCTTAATACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAGTC 1078786 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| | | || |||| || || || ||||||||||| || || ||||||| Sbjct 1078787 TGATAGTGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCTGG 1078846 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||| || || || || || | || | ||||| || || | ||| Sbjct 1078847 GGGAATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGCTGGTTC 1078906 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | || || || || || || | ||||| |||||||| ||||| Sbjct 1078907 AACTTCAAGGGTGATGGTTTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 1078957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359970792785373