Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= AC_000018.1 Length=35514 Score E Sequences producing significant alignments: (Bits) Value seq201746 147 5e-31 >seq201746 Length=230 Score = 147 bits (162), Expect = 5e-31 Identities = 151/187 (81%), Gaps = 9/187 (5%) Strand=Plus/Minus Query 6062 TCCATCTGGTCAGAAAACACAATCTTCTTGTTGTCCAGCTTGG-TAGCAAATGATCCATA 6120 |||||||||||||||| |||||||| |||| ||| ||||||| | ||||| || || || Sbjct 210 TCCATCTGGTCAGAAAG-ACAATCTT-TTGT-GTC-AGCTTGGGTGGCAAACGACCCGTA 155 Query 6121 GAGGGCATTGGATAGAAGCTTGGCGATGG-AGCGCATGG--TTTGGTTCTTTTCCTTGTC 6177 |||||| ||||| || | ||||||||||| |||||| || ||||||| ||| | || Sbjct 154 GAGGGCGTTGGACAGCAACTTGGCGATGGGAGCGCAGGGGTTTTGGTT-TTTGCGCGATC 96 Query 6178 CGCGCGCTCCTTGGCGGCGATGTTAAGCTGGACGTACTCGCGCGCCACACATTTCCATTC 6237 |||||||||||||| |||||||| ||||| ||||| |||||||| || || |||||| Sbjct 95 GGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTC 36 Query 6238 AGGGAAG 6244 || ||| Sbjct 35 GGGAAAG 29 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113088045282128