Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= AC_000189.1 Length=34094 Score E Sequences producing significant alignments: (Bits) Value seq201746 113 1e-20 >seq201746 Length=230 Score = 113 bits (124), Expect = 1e-20 Identities = 126/162 (78%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 6295 CCGTAGAGGGCGTTGGAGAGAAGCTTGGCGATGCT-GCGGAGCG--TTTGGTTTCTGTCC 6351 ||||||||||||||||| || | |||||||||| ||| || | |||||||| || | Sbjct 159 CCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGGAGCGCAGGGGTTTTGGTTTTTG-CG 101 Query 6352 CGGTCGGCCTTTTCCTTGGCAGCGATGTTGAGCTGCACGTAGTCTCGGGCGAGGCAGCGC 6411 || ||||| |||||||| |||||||| ||||||||||| || || || | ||| ||| Sbjct 100 CGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGC 41 Query 6412 CACTCGGGGAAGATGCTGTTGCGCTCGTCCGGCAGGAGGCGC 6453 || ||||| ||| | || |||||||||| |||| ||| || Sbjct 40 CATTCGGGAAAG-CGGTG-TGCGCTCGTCGGGCACCAGGTGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108561463246368