Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq197649 82.4 5e-11 >seq197649 Length=5997 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 101687 TCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACT 101746 || ||||||| | ||| | ||||||||||| | || || | ||| ||||| || Sbjct 3106 TCGATGTGATTCAGATACACATGAGCATCTCCCAGTGTGTGCACAAAGTCTCCTGGTTTG 3047 Query 101747 AGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGC 101806 || ||||| ||||| || |||||| | || | || |||||||| |||||||| || ||| Sbjct 3046 AGGTTAGTCACATGTGCTATCATGTAGGTGAGGAGGGAATAGCTGGCAATGTTGAAGGGC 2987 Query 101807 ACTCC 101811 ||||| Sbjct 2986 ACTCC 2982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359830019039294